Tableau information
Concept source: d3kl6a_ amino acid (a.a.) range (TRP29)(GLY69)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TRP29) (ASN35) E1
(CYS42) (SER48) E2
(PHE50) (THR54) E3
(ALA55) (GLN61) H4
(ARG63) (GLY69) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 133.9° E2
E3 -74.3° 144.7° E3
H4 28.4° -122.6° 92.2° H4
E5 147.2° -63.1° 106.1° 121.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2w7ub_ : (SER17) (HIS54) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d2f9oc_ : (GLN30) (LEU68) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2vbua_ : (PHE73) (LYS131) [view usage] : b.43.5.2 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |CTP-dependent riboflavin kinase-like |CTP-dependent riboflavin kinase, Rfk |Methanococcus jannaschii [TaxId: 2190]
d1b37a2 : (ASP294) (ASP351) [view usage] : d.16.1.5 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |L-aminoacid/polyamine oxidase |Polyamine oxidase |Maize (Zea mays) [TaxId: 4577]
d1qtfa_ : (GLY40) (PRO81) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Exfoliative toxin B |Staphylococcus aureus [TaxId: 1280]
d1exfa_ : (ILE30) (PRO68) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Epidermolytic (exfoliative) toxin A |Staphylococcus aureus [TaxId: 1280]
d4agka_ : (GLY190) (ASN225) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Aura virus [TaxId: 44158]
d1qy6a_ : (TYR24) (PRO67) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |V8 protease |Staphylococcus aureus [TaxId: 1280]
d2p3ma1 : (ILE80) (GLU136) [view usage] : b.43.5.2 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |CTP-dependent riboflavin kinase-like |CTP-dependent riboflavin kinase, Rfk |Methanococcus jannaschii [TaxId: 2190]
d4omca2 : (HIS486) (HIS537) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xxfa_ : (GLN30) (GLY70) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
d1sgde_ : (ASP29) (ALA68) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Protease B |Streptomyces griseus, strain k1 [TaxId: 1911]
d1xxda_ : (GLN30) (GLY70) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
d4agja_ : (GLY190) (ASP225) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Aura virus [TaxId: 44158]
d2vbva_ : (GLY69) (GLY132) [view usage] : b.43.5.2 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |CTP-dependent riboflavin kinase-like |CTP-dependent riboflavin kinase, Rfk |Methanococcus jannaschii [TaxId: 2190]
d2ebhx3 : (GLY1186) (PRO1239) [view usage] : d.3.1.17 |Cysteine proteinases |Cysteine proteinases |PMT C-terminal domain like |Dermonecrotic toxin, ToxA |Pasteurella multocida [TaxId: 747]
d2as9a_ : (GLY18) (HIS54) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1hl8a1 : (GLY406) (VAL447) [view usage] : b.71.1.3 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |Putative alpha-L-fucosidase C-terminal domain |Putative alpha-L-fucosidase C-terminal domain |Thermotoga maritima [TaxId: 2336]
d2ox7b_ : (ASP85) (GLY135) [view usage] : b.172.1.1 |YopX-like |YopX-like |YopX-like |Hypothetical protein EF1440 |Enterococcus faecalis [TaxId: 1351]
d1hl9a1 : (GLY406) (GLU448) [view usage] : b.71.1.3 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |Putative alpha-L-fucosidase C-terminal domain |Putative alpha-L-fucosidase C-terminal domain |Thermotoga maritima [TaxId: 2336]
d1dyla_ : (GLY191) (ASN226) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |SFV capsid |Semliki forest virus [TaxId: 11033]
d3bq4a_ : (ASN143) (ASP199) [view usage] : b.21.1.0 |Virus attachment protein globular domain |Virus attachment protein globular domain |automated matches |automated matches |Human adenovirus 35 [TaxId: 10522]
d1wjra_ : (ILE18) (PHE60) [view usage] : b.34.9.3 |SH3-like barrel |Tudor/PWWP/MBT |MBT repeat |Scm-like with four MBT domains protein 2, SFMBT2 (KIAA1617) |Human (Homo sapiens) [TaxId: 9606]
d3ppea1 : (ASN5) (TYR51) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d4jcna_ : (SER89) (PRO133) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Staphylococcus epidermidis [TaxId: 176280]
d1csoe_ : (ASP29) (ALA68) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Protease B |Streptomyces griseus, strain k1 [TaxId: 1911]
d4klna1 : (VAL57) (PRO104) [view usage] : b.52.2.0 |Double psi beta-barrel |ADC-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cx1a_ : (PRO21) (ASN56) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |Cellulose-binding domain of cellulase C |Cellulomonas fimi [TaxId: 1708]
d2oq5a_ : (TRP29) (GLY69) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2oyna1 : (LYS76) (LYS131) [view usage] : b.43.5.2 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |CTP-dependent riboflavin kinase-like |CTP-dependent riboflavin kinase, Rfk |Methanococcus jannaschii [TaxId: 2190]
d3sora_ : (GLN402) (GLY447) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
d1agja_ : (ILE46) (PRO88) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Epidermolytic (exfoliative) toxin A |Staphylococcus aureus [TaxId: 1280]
d3bsqa_ : (TRP29) (LEU66) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1buic_ : (ILE87) (GLU134) [view usage] : d.15.5.1 |beta-Grasp (ubiquitin-like) |Staphylokinase/streptokinase |Staphylokinase/streptokinase |Staphylokinase |Staphylococcus aureus [TaxId: 1280]
d2ec5a3 : (GLY1186) (PRO1239) [view usage] : d.3.1.17 |Cysteine proteinases |Cysteine proteinases |PMT C-terminal domain like |Dermonecrotic toxin, ToxA |Pasteurella multocida [TaxId: 747]
d1p3ca_ : (TYR24) (PRO65) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Glutamyl endopeptidase |Bacillus intermedius [TaxId: 1400]
d2d9ra1 : (ASN57) (PRO103) [view usage] : b.129.2.1 |Double-split beta-barrel |AF2212/PG0164-like |PG0164-like |Hypothetical protein PG0164 |Porphyromonas gingivalis [TaxId: 837]
d2ebfx3 : (GLY1186) (PRO1239) [view usage] : d.3.1.17 |Cysteine proteinases |Cysteine proteinases |PMT C-terminal domain like |Dermonecrotic toxin, ToxA |Pasteurella multocida [TaxId: 747]
d1duea_ : (ILE46) (PRO88) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Epidermolytic (exfoliative) toxin A |Staphylococcus aureus [TaxId: 1280]
d2ggvb_ : (VAL22) (GLY61) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |West Nile virus [TaxId: 11082]
d4ty6a_ : (GLN30) (GLY69) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
d3u1jb_ : (VAL22) (ASN61) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NS3 protease |Dengue virus 3 [TaxId: 408693]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.47, i.6, b.18, d.3, b.1, b.129, b.52, b.21, b.34, d.15, b.43, d.16, b.71, b.172