Tableau information
Concept source: d2z1ha_ amino acid (a.a.) range (LYS3)(ASP70)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS3) (CYS13) E1
(PRO19) (ARG29) E2
(GLY30) (THR40) E3
(THR43) (ALA58) H4
(GLU64) (ASP70) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.7° E2
E3 -26.3° 168.0° E3
H4 158.0° -29.7° 141.0° H4
E5 -23.8° 142.7° -49.0° 161.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wpqa1 : (PRO113) (ALA150) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1k51a_ : (HIS-6) (ASP53) [view usage] : d.15.7.1 |beta-Grasp (ubiquitin-like) |Immunoglobulin-binding domains |Immunoglobulin-binding domains |Immunoglobulin light chain-binding domain of protein L |Peptostreptococcus magnus [TaxId: 1260]
d3vehb_ : (GLN61) (PHE112) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d1woqa1 : (LEU14) (THR81) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Inorganic polyphosphate/ATP-glucomannokinase PPGMK |Arthrobacter sp. KM [TaxId: 184230]
d3st6a_ : (GLN61) (TRP109) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d1czan1 : (PHE80) (SER155) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
d4ijna1 : (MET1) (VAL74) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1saza1 : (ILE4) (ARG74) [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |butyrate kinase 2 |Thermotoga maritima [TaxId: 2336]
d2ap1a2 : (MET1) (PRO65) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Putative regulator protein YcfX |Salmonella typhimurium [TaxId: 90371]
d2a6ab1 : (ASN2) (GLY63) [view usage] : c.55.1.9 |Ribonuclease H-like motif |Actin-like ATPase domain |YeaZ-like |Hypothetical protein TM0874 |Thermotoga maritima [TaxId: 2336]
d4phtx1 : (SER2) (ALA58) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
d1q18a1 : (ALA5) (ALA62) [view usage] : c.55.1.7 |Ribonuclease H-like motif |Actin-like ATPase domain |Glucokinase |Glucokinase Glk |Escherichia coli [TaxId: 562]
d3u5ik_ : (THR22) (LEU78) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d4ny0a3 : (THR301) (PRO362) [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3logb_ : (GLN61) (GLU113) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d2ocea5 : (ALA330) (GLY390) [view usage] : c.55.3.13 |Ribonuclease H-like motif |Ribonuclease H-like |Tex RuvX-like domain-like |Transcriptional accessory factor Tex |Pseudomonas aeruginosa [TaxId: 287]
d3p4ib1 : (ALA8) (VAL83) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Mycobacterium avium [TaxId: 1764]
d2lsna_ : (GLY8) (ASP83) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Human spumaretrovirus [TaxId: 11963]
d3o8ma1 : (PHE82) (SER157) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
d1o13a_ : (MSE1) (VAL70) [view usage] : c.55.5.1 |Ribonuclease H-like motif |Nitrogenase accessory factor-like |MTH1175-like |Hypothetical protein TM1816 |Thermotoga maritima [TaxId: 2336]
d2al6b2 : (THR301) (PRO362) [view usage] : b.55.1.5 |PH domain-like barrel |PH domain-like |Third domain of FERM |Focal adhesion kinase 1 |Chicken (Gallus gallus) [TaxId: 9031]
d3zdtb3 : (THR301) (PRO362) [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2aeha2 : (THR301) (ILE359) [view usage] : b.55.1.5 |PH domain-like barrel |PH domain-like |Third domain of FERM |Focal adhesion kinase 1 |Chicken (Gallus gallus) [TaxId: 9031]
d1rdca_ : (VAL5) (THR69) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1ng9a3 : (ARG128) (ALA181) [view usage] : c.55.6.1 |Ribonuclease H-like motif |DNA repair protein MutS, domain II |DNA repair protein MutS, domain II |DNA repair protein MutS, domain II |Escherichia coli [TaxId: 562]
d3alya_ : (MET1) (ASP76) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d2hoea3 : (TYR76) (PRO145) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |N-acetylglucosamine kinase |Thermotoga maritima [TaxId: 2336]
d4ijnb1 : (VAL2) (ARG72) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1jaxa_ : (ILE92) (ALA131) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Coenzyme F420H2:NADP+ oxidoreductase (FNO) |Archaeoglobus fulgidus [TaxId: 2234]
d1rbsa_ : (VAL5) (ASP70) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2, i.1, c.55, b.55, d.15, d.161