Tableau information
Concept source: d2di9a1 amino acid (a.a.) range (ALA74)(MET120)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA74) (ASP80) E1
(GLY84) (LYS94) E2
(GLY96) (PHE104) E3
(ILE109) (PHE114) H4
(PHE114) (MET120) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 167.1° E2
E3 -34.5° 154.7° E3
H4 140.0° -27.1° 159.1° H4
E5 121.5° -45.8° 149.0° -19.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1cywa_ : (GLY180) (ALA224) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Quinol oxidase (CyoA) |Escherichia coli [TaxId: 562]
d1opfa_ : (GLY8) (LEU83) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Escherichia coli, different sequences [TaxId: 562]
d1utca2 : (LEU30) (PRO65) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ujta_ : (VAL17) (ALA69) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |KIAA1568 protein |Human (Homo sapiens) [TaxId: 9606]
d2d7oa1 : (GLU55) (THR99) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin C |Human (Homo sapiens) [TaxId: 9606]
d1vs5e2 : (ASN18) (ALA74) [view usage] : d.50.1.2 |dsRBD-like |dsRNA-binding domain-like |Ribosomal S5 protein, N-terminal domain |Ribosomal S5 protein, N-terminal domain |Escherichia coli [TaxId: 562]
d1fa4a_ : (LEU59) (VAL103) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Plastocyanin |Anabaena variabilis [TaxId: 1172]
d1gfma_ : (GLY8) (LEU83) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Escherichia coli, different sequences [TaxId: 562]
d3njeb_ : (GLN82) (VAL135) [view usage] : d.24.1.0 |Pili subunits |Pili subunits |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1gfpa_ : (GLY8) (LEU83) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Escherichia coli, different sequences [TaxId: 562]
d2dlga1 : (GLY42) (PRO91) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
d2diba1 : (GLY68) (GLU117) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
d2cria_ : (ASN64) (ASN134) [view usage] : b.1.11.0 |Immunoglobulin-like beta-sandwich |PapD-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3evxa_ : (ASP50) (VAL99) [view usage] : d.20.1.4 |UBC-like |UBC-like |UFC1-like |Ufm1-conjugating enzyme 1, UFC1 |Human (Homo sapiens) [TaxId: 9606]
d2x44d_ : (GLU59) (PRO101) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2k3ta_ : (LYS2473) (GLY2518) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kpaa_ : (ASP49) (PRO99) [view usage] : d.20.1.4 |UBC-like |UBC-like |UFC1-like |automated matches |Leishmania major [TaxId: 5664]
d2k07a_ : (ASP50) (PRO100) [view usage] : d.20.1.4 |UBC-like |UBC-like |UFC1-like |Ufm1-conjugating enzyme 1, UFC1 |Human (Homo sapiens) [TaxId: 9606]
d2onua_ : (ASP20) (ASN69) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |automated matches |Plasmodium falciparum [TaxId: 36329]
d1bt9a_ : (GLY8) (LEU83) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Escherichia coli, different sequences [TaxId: 562]
d2eeba_ : (CYS57) (GLY100) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
d1k32a3 : (THR637) (ASP674) [view usage] : b.69.9.1 |7-bladed beta-propeller |Tricorn protease domain 2 |Tricorn protease domain 2 |Tricorn protease domain 2 |Thermoplasma acidophilum [TaxId: 2303]
d1hxua_ : (GLY8) (LEU83) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Escherichia coli, different sequences [TaxId: 562]
d2lw8a_ : (TRP62) (ALA124) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3v8oa2 : (CYS712) (GLU760) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4n68a_ : (SER876) (ARG929) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ksra_ : (SER6) (GLY61) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |F-actin cross-linking gelation factor (ABP-120) repeats |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1innb_ : (GLU8) (ILE91) [view usage] : d.185.1.2 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |Autoinducer-2 production protein LuxS |Autoinducer-2 production protein LuxS |Deinococcus radiodurans [TaxId: 1299]
d1ks6a_ : (GLY65) (ALA106) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |TGF-beta type II receptor extracellular domain |Chicken (Gallus gallus) [TaxId: 9031]
d2eeca_ : (MET66) (GLY110) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.69, f.4, d.185, b.18, b.6, b.1, d.20, d.24, d.50, g.7