Protein Concepts Dictionary

Tableau information

Concept source:  d4blma_  amino acid (a.a.) range (TRP229)(LEU290)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (TRP229)  (SER240) E1
	  (GLY242)  (PRO252) E2
	  (ASP257)  (ASP268) E3
	  (ASP271)  (LYS277) E4
	  (LYS277)  (LEU290) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      168.3°   E2                          
E3      -18.9°  171.9°   E3                   
E4      164.7°  -25.9°  146.2°   E4            
H5      137.3°  -37.2°  140.3°   44.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4m3ka_ :   (GLY228)  (LEU290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Bacillus licheniformis [TaxId: 1402]
 d4blma_ :   (TRP229)  (LEU290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Bacillus licheniformis [TaxId: 1402]
 d3leza_ :   (TRP242)  (ASN304)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Oceanobacillus iheyensis [TaxId: 182710]
 d4n92a_ :   (TRP229)  (ASN291)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Bacillus licheniformis [TaxId: 1402]
 d1lzla_ :    (GLY48)  (PHE101)   [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Heroin esterase |Rhodococcus sp. [TaxId: 1831]
 d2dnsa_ :   (HIS307)  (SER363)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |D-Amino acid amidase DaaA |Ochrobactrum anthropi [TaxId: 529]
 d2dnsc_ :   (HIS307)  (ARG362)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |D-Amino acid amidase DaaA |Ochrobactrum anthropi [TaxId: 529]
 d2wyxa_ :   (TRP229)  (ILE285)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TOHO-1 [TaxId: 562]
 d4n1hc_ :   (TRP229)  (LEU290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Bacillus licheniformis [TaxId: 1402]
 d3bp8a2 :    (ALA84)  (HIS139)   [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Mlc protein |Escherichia coli [TaxId: 562]
 d2efuc_ :   (HIS307)  (SER363)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |D-Amino acid amidase DaaA |Ochrobactrum anthropi [TaxId: 529]
 d1w7fa_ :   (GLY228)  (ALA289)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Bacillus licheniformis [TaxId: 1402]
 d1mbla_ :   (TRP229)  (ASN291)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Bacillus licheniformis [TaxId: 1402]
 d3sh9b_ :   (TRP229)  (ALA289)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Bacillus licheniformis [TaxId: 1402]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.3,    c.69,    c.55