Protein Concepts Dictionary

Tableau information

Concept source:  d4bgze_  amino acid (a.a.) range (GLU14)(LEU61)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU14)   (ILE19) E1
	   (ASN23)   (THR27) E2
	   (THR27)   (GLY39) E3
	   (VAL47)   (LEU52) E4
	   (SER56)   (LEU61) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      126.5°   E2                          
E3       99.6° -109.1°   E3                   
E4       79.1° -151.4°  -47.8°   E4            
H5     -100.6°   68.6°   50.4°   96.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3m6sc_ :    (ASP14)   (GLY63)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2fk0a1 :    (GLU23)   (LEU70)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4m4ye_ :    (ASP24)   (GLY72)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wr0c1 :    (GLU18)   (GLY67)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Unidentified influenza virus [TaxId: 11309]
 d4kdqa_ :    (GLU15)   (LEU62)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wrec1 :    (GLU18)   (GLY67)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId: 382813]
 d3zp6e_ :    (GLU18)   (LEU66)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 11320]
 d3m6sa_ :    (ASP14)   (GLY63)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3m6si_ :    (ASP14)   (GLY63)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3qqoa_ :    (GLU24)   (GLY72)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d1rd8a_ :    (ASP23)   (LEU71)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4jull_ :    (GLU23)   (LEU70)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wrda1 :    (GLU18)   (LEU65)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId: 382813]
 d4bgze_ :    (GLU14)   (LEU61)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza virus [TaxId: 375457]
 d3gbna_ :    (ASP24)   (LEU71)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza a virus (a/brevig mission/1/1918(h1n1)) [TaxId: 88776]
 d4fiua1 :    (THR18)   (VAL67)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3s11c_ :    (GLU23)   (LEU70)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 11320]
 d4juga_ :    (ASP18)   (LEU66)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3al4a_ :    (ASP20)   (LEU68)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4gmsa_ :    (PRO21)   (LEU71)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3m6sg_ :    (ASP14)   (GLY63)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4k65a_ :    (GLU18)   (LEU66)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4jule_ :    (GLU23)   (LEU71)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4uo0c_ :    (ALA21)   (LEU71)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/equine/richmond/1/2007)(h3n8)) [TaxId: 560387]
 d4jtxe_ :    (ASP20)   (GLY69)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2fk0c_ :    (GLU23)   (LEU71)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/viet nam/1203/2004(h5n1)) [TaxId: 284218]
 d2wr0a1 :    (GLU18)   (GLY67)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Unidentified influenza virus [TaxId: 11309]
 d1hgfa_ :    (PRO21)   (GLY72)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3ubea_ :    (ASP24)   (GLY72)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4uo3e_ :    (ALA21)   (LEU71)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus [TaxId: 560387]
 d2wrdc1 :    (GLU18)   (LEU65)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId: 382813]
 d2wreb1 :    (GLU18)   (GLY67)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId: 382813]
 d4jtxc_ :    (ASP20)   (GLY69)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2ibxa1 :    (GLU18)   (LEU66)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wrgh_ :    (ASP18)   (LEU66)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza a virus (a/brevig mission/1/1918(h1n1)) [TaxId: 88776]
 d3lzga_ :    (ASP24)   (GLY72)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wrba1 :    (GLU18)   (LEU66)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza A virus [TaxId: 11320]
 d3lzgk_ :    (ASP24)   (GLY72)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4bh2a_ :    (GLU14)   (LEU62)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza virus [TaxId: 284218]
 d1ruyh_ :    (ASP18)   (LEU66)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4kvna1 :    (PRO37)   (LEU87)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wr0b1 :    (GLU18)   (GLY67)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Unidentified influenza virus [TaxId: 11309]
 d3sm5a_ :    (ASP18)   (GLY67)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4jtxa_ :    (ASP20)   (GLY69)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3m6sk_ :    (ASP14)   (GLY63)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wr7c1 :    (GLU18)   (LEU66)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/singapore/1/1957(h2n2)) [TaxId: 382781]
 d4cqva_ :    (GLU14)   (LEU62)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/turkey/turkey/1/2005(h5n1)) [TaxId: 375457]
 d3zpae_ :    (GLU18)   (LEU66)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/vietnam/1194/2004(h5n1)) [TaxId: 644788]
 d2wrdb1 :    (GLU18)   (LEU65)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId: 382813]
 d4i78a_ :    (ASN23)   (GLY72)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza A virus [TaxId: 1129347]
 d4edac_ :    (THR13)   (GLY63)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4k62a_ :    (GLU18)   (LEU65)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4cr0a_ :    (GLU14)   (LEU62)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/vietnam/1194/2004(h5n1)) [TaxId: 644788]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.19