Protein Concepts Dictionary

Tableau information

Concept source:  d1efna_  amino acid (a.a.) range (ALA85)(GLY117)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA85)   (TYR91) E1
	   (TYR91)   (THR97) E2
	   (ASP99)  (HIS104) E3
	  (GLU107)  (ILE111) E4
	  (ILE111)  (GLY117) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2       94.1°   E2                          
E3      -64.8° -150.0°   E3                   
E4      136.7°   64.9° -145.0°   E4            
H5       78.4°   75.2° -117.6°  -60.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2rn8a_ :   (THR174)  (GLU205)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3i5ra_ :     (ALA3)   (GLY41)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3uf4a1 :    (THR85)  (GLY117)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2kt1a_ :     (PHE7)   (GLY42)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1m27c_ :    (THR85)  (GLU116)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Fyn proto-oncogene tyrosine kinase, SH3 domain |Human (Homo sapiens) [TaxId: 9606]
 d1efna_ :    (ALA85)  (GLY117)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Fyn proto-oncogene tyrosine kinase, SH3 domain |Human (Homo sapiens) [TaxId: 9606]
 d1avzc_ :    (THR85)  (GLU116)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Fyn proto-oncogene tyrosine kinase, SH3 domain |Human (Homo sapiens) [TaxId: 9606]
 d1pksa_ :     (GLY5)   (ALA39)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain |Human (Homo sapiens) [TaxId: 9606]
 d3o5za_ :     (PHE7)   (GLY42)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jm8a_ :     (GLU7)   (ASN38)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
 d3o5zb_ :     (PHE7)   (ALA40)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3i5sa_ :     (TYR6)   (GLY41)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4d8dc_ :    (THR85)  (GLY117)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Fyn proto-oncogene tyrosine kinase, SH3 domain |Human (Homo sapiens) [TaxId: 9606]
 d3cqta_ :     (LEU3)   (GLY34)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
 d2o2oa_ :   (ARG101)  (GLU133)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.34