Tableau information
Concept source: d1orva1 amino acid (a.a.) range (TYR457)(GLN508)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR457) (ASN463) E1
(LYS466) (CYS472) E2
(LEU477) (SER486) E3
(LEU491) (GLU495) E4
(ASN497) (GLN508) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 160.2° E2
E3 -37.3° 162.5° E3
E4 124.5° -36.4° 159.2° E4
H5 172.6° 12.4° -150.1° 48.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1n1ma1 : (TYR457) (GLN508) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2hvbb_ : (VAL26) (LEU88) [view usage] : b.1.13.1 |Immunoglobulin-like beta-sandwich |Superoxide reductase-like |Superoxide reductase-like |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d2gexa1 : (ASP61) (GLY133) [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |Nogalamycin biosynthesis protein SnoL |Streptomyces nogalater [TaxId: 38314]
d1s5aa_ : (SER71) (GLY136) [view usage] : d.17.4.10 |Cystatin-like |NTF2-like |PhzA/PhzB-like |Hypothetical protein YesE |Bacillus subtilis [TaxId: 1423]
d1b6fa_ : (PHE79) (ALA153) [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |Major tree pollen allergen |White birch (Betula verrucosa), Bet v 1 [TaxId: 3505]
d1dzra_ : (GLN48) (GLN98) [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Salmonella typhimurium [TaxId: 90371]
d1orva1 : (TYR457) (GLN508) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1s5ac_ : (SER71) (GLY136) [view usage] : d.17.4.10 |Cystatin-like |NTF2-like |PhzA/PhzB-like |Hypothetical protein YesE |Bacillus subtilis [TaxId: 1423]
d3qbja1 : (TYR457) (GLN508) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1xnaa_ : (LYS41) (SER101) [view usage] : b.18.1.8 |Galactose-binding domain-like |Galactose-binding domain-like |N-terminal domain of xrcc1 |N-terminal domain of xrcc1 |Human (Homo sapiens) [TaxId: 9606]
d3gvka1 : (ASP331) (ASN386) [view usage] : b.68.1.2 |6-bladed beta-propeller |Sialidases |Endo-alpha-sialidase |automated matches |Enterobacteria phage [TaxId: 344021]
d1j5qa2 : (LEU222) (SER342) [view usage] : b.121.2.3 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Major capsid protein vp54 |Major capsid protein vp54 |Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]
d2gexb_ : (ASP61) (SER126) [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |Nogalamycin biosynthesis protein SnoL |Streptomyces nogalater [TaxId: 38314]
d4mjva_ : (GLY408) (MET471) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza a virus [TaxId: 385580]
d1j2ea1 : (TYR457) (GLN508) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3grdb_ : (TYR67) (LYS132) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Bacillus cereus [TaxId: 222523]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, b.82, d.129, b.18, b.121, b.1, d.17