Tableau information
Concept source: d1o7ga2 amino acid (a.a.) range (ASN297)(GLY353)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN297) (PHE301) E1
(ASN303) (LEU307) E2
(GLY311) (ASN317) E3
(ASN322) (GLU333) E4
(PRO337) (GLY353) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 161.9° E2
E3 -31.5° 166.6° E3
E4 124.1° -38.0° 154.7° E4
H5 -73.2° 123.7° -44.7° 159.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1iakb2 : (PRO13) (TRP61) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-AK [TaxId: 10090]
d2qr0b1 : (GLY16) (ARG66) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), gamma-chain [TaxId: 9606]
d2gbwa2 : (ASN295) (PHE350) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Sphingobium yanoikuyae [TaxId: 13690]
d2hmka2 : (ASN297) (ARG350) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Pseudomonas sp. [TaxId: 69011]
d1eg9a2 : (ASN297) (GLY353) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Pseudomonas putida [TaxId: 303]
d1e42a2 : (ASN872) (LYS936) [view usage] : d.105.1.1 |Subdomain of clathrin and coatomer appendage domain |Subdomain of clathrin and coatomer appendage domain |Clathrin adaptor appendage, alpha and beta chain-specific domain |Beta2-adaptin AP2, C-terminal subdomain |Human (Homo sapiens) [TaxId: 9606]
d1ck7a1 : (ASP476) (PRO514) [view usage] : b.66.1.1 |4-bladed beta-propeller |Hemopexin-like domain |Hemopexin-like domain |Gelatinase A (MMP-2), C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1lnub2 : (GLY39) (GLN90) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-AB [TaxId: 10090]
d1iaob2 : (GLY13) (GLN64) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-AD [TaxId: 10090]
d1z45a1 : (VAL360) (ASN417) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1o7ga2 : (ASN297) (GLY353) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Pseudomonas putida [TaxId: 303]
d4fqxb1 : (LEU8) (GLN64) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1k2db2 : (ARG5) (ASP57) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-AU [TaxId: 10090]
d1k8ib2 : (PHE2) (ASN62) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), H2-DM [TaxId: 10090]
d1neza2 : (GLY100) (ALA150) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC, alpha-1 and alpha-2 domains |Mouse (Mus musculus), tla(c), H-2 class [TaxId: 10090]
d1d1jb_ : (LYS69) (SER137) [view usage] : d.110.1.1 |Profilin-like |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Human (Homo sapiens), isoform II [TaxId: 9606]
d1jk8b2 : (PHE7) (GLN64) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DQ8 [TaxId: 9606]
d3edda3 : (ARG518) (LYS563) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Flavobacterium sp. [TaxId: 197856]
d1d1jc_ : (LYS69) (SER137) [view usage] : d.110.1.1 |Profilin-like |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Human (Homo sapiens), isoform II [TaxId: 9606]
d1cvsc2 : (ALA263) (LEU326) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fibroblast growth factor receptor, FGFR |Human (Homo sapiens), FGFR1 [TaxId: 9606]
d1jfma_ : (TYR89) (ASP145) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |NK cell ligand RAE-1 beta |Mouse (Mus musculus) [TaxId: 10090]
d1ndoe2 : (ASN297) (LYS375) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Pseudomonas putida [TaxId: 303]
d1mujb2 : (HIS6) (GLN64) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-AB [TaxId: 10090]
d2qpva1 : (GLY56) (LEU130) [view usage] : d.129.3.8 |TBP-like |Bet v1-like |Atu1531-like |Uncharacterized protein Atu1531 |Agrobacterium tumefaciens [TaxId: 358]
d1z94b_ : (LEU72) (LEU140) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Hypothetical protein CV1439 |Chromobacterium violaceum [TaxId: 536]
d1xn6a_ : (GLY57) (ASN134) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Hypothetical protein BC4709 |Bacillus cereus [TaxId: 1396]
d1q7ha2 : (SER30) (TYR65) [view usage] : d.17.6.2 |Cystatin-like |Pre-PUA domain |Hypothetical protein Ta1423, N-terminal domain |Hypothetical protein Ta1423, N-terminal domain |Thermoplasma acidophilum [TaxId: 2303]
d2b1xa2 : (PHE293) (PHE362) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Rhodococcus sp. ncimb12038 [TaxId: 92694]
d1qveb_ : (LYS80) (PRO139) [view usage] : d.24.1.1 |Pili subunits |Pili subunits |Pilin |Pilin P1 |Pseudomonas aeruginosa [TaxId: 287]
d1d1ja_ : (LYS69) (ASP138) [view usage] : d.110.1.1 |Profilin-like |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Human (Homo sapiens), isoform II [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.30, d.129, b.1, d.110, d.17, d.19, b.71, d.105, d.24, b.66