Tableau information
Concept source: d2rgla_ amino acid (a.a.) range (ALA428)(LYS475)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA428) (SER434) E1
(THR446) (GLY450) E2
(ILE451) (ASP455) E3
(GLU460) (ALA465) E4
(ALA465) (LYS475) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -142.5° E2
E3 -22.9° 132.3° E3
E4 125.3° -65.3° 147.8° E4
H5 -160.1° -17.9° -145.1° -60.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1cbga_ : (LYS441) (LYS489) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Creeping white clover (Trifolium repens) [TaxId: 3899]
d2rgla_ : (ALA428) (LYS475) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Oryza sativa [TaxId: 39947]
d3wq6a_ : (LYS458) (LEU506) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Camellia sinensis [TaxId: 4442]
d1v03a_ : (ARG448) (GLY496) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Sorghum (Sorghum bicolor) [TaxId: 4558]
d1np2a_ : (ARG380) (GLN430) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Thermus nonproteolyticus [TaxId: 116039]
d3aisa_ : (GLY451) (SER498) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Wheat (Triticum aestivum) [TaxId: 4565]
d2jf6b_ : (LYS460) (GLY508) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rauvolfia serpentina [TaxId: 4060]
d2fcia1 : (GLY32) (HIS87) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Phospholipase C-gamma-1 |Cow (Bos taurus) [TaxId: 9913]
d4jiea_ : (ILE431) (SER478) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Oryza sativa [TaxId: 39946]
d3wq4b_ : (LYS458) (LEU506) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Camellia sinensis [TaxId: 4442]
d3wq5b_ : (LYS458) (LEU506) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Camellia sinensis [TaxId: 4442]
d3zjkb_ : (ARG380) (ARG428) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermus thermophilus [TaxId: 274]
d3wbaa_ : (ARG439) (LEU485) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Oryza sativa [TaxId: 39947]
d4bcea_ : (ARG380) (ALA429) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3gnoa_ : (ARG439) (LEU485) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Oryza sativa [TaxId: 39947]
d4hz8a_ : (ARG429) (ASN477) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Uncultured bacterium [TaxId: 77133]
d3cmja_ : (ARG429) (ASN477) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Uncultured bacterium [TaxId: 77133]
d3scpa_ : (ALA428) (MET473) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Oryza sativa [TaxId: 39947]
d3scva_ : (ALA428) (MET473) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Oryza sativa [TaxId: 39947]
d2o9pa_ : (LYS397) (ASN446) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Paenibacillus polymyxa [TaxId: 1406]
d4jhoa_ : (GLY432) (SER478) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Oryza sativa [TaxId: 39946]
d3zjkc_ : (ARG380) (ALA429) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermus thermophilus [TaxId: 274]
d3ptka_ : (LYS437) (LEU485) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rice (Oryza sativa) [TaxId: 4530]
d3wq4a_ : (LYS458) (LEU506) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Camellia sinensis [TaxId: 4442]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.93