Tableau information
Concept source: d2jc7a_ amino acid (a.a.) range (ILE207)(GLY273)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE207) (ASN211) E1
(GLY212) (MET223) E2
(PRO227) (ALA239) E3
(GLY241) (GLU254) E4
(SER257) (GLY273) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 147.7° E2
E3 -42.6° 168.8° E3
E4 127.0° -26.9° 162.7° E4
H5 -29.5° 142.9° -40.6° 140.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ei5a3 : (GLY273) (GLY331) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |D-aminopeptidase, N-terminal domain |Ochrobactrum anthropi [TaxId: 529]
d3paea_ : (ILE207) (GLY273) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d1ul7a_ : (CYS37) (LEU100) [view usage] : d.129.6.1 |TBP-like |KA1-like |Kinase associated domain 1, KA1 |Map/microtubule affinity-regulating kinase 3 |Mouse (Mus musculus) [TaxId: 10090]
d1pqza2 : (LEU10) (SER83) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Immunomodulatory protein m144, alpha-1 and alpha-2 domains |Murine cytomegalovirus [TaxId: 10366]
d1w96c1 : (GLY452) (SER531) [view usage] : b.84.2.1 |Barrel-sandwich hybrid |Rudiment single hybrid motif |BC C-terminal domain-like |Acetyl-CoA carboxylase, BC-C subdomain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3if6b_ : (THR199) (ASP261) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2q9ua1 : (TYR7) (CYS73) [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |Nitric oxide reductase N-terminal domain |Giardia intestinalis [TaxId: 5741]
d2yntb_ : (PRO41) (GLY105) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2fy2a2 : (VAL536) (LEU606) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Choline O-acetyltransferase |Human (Homo sapiens) [TaxId: 9606]
d2nnab2 : (PHE7) (GLN64) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DR2 [TaxId: 9606]
d2fy3a2 : (VAL536) (LEU606) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Choline O-acetyltransferase |Human (Homo sapiens) [TaxId: 9606]
d3v7ba_ : (GLU93) (GLY147) [view usage] : d.107.1.4 |Mog1p/PsbP-like |Mog1p/PsbP-like |DIP2269-like |Hypothetical protein DIP2269 |Corynebacterium diphtheriae [TaxId: 1717]
d1c8za_ : (SER420) (SER500) [view usage] : d.23.1.1 |Tubby C-terminal domain-like |Tubby C-terminal domain-like |Transcriptional factor tubby, C-terminal domain |Transcriptional factor tubby, C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d2bmia_ : (ASP10) (HIS72) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
d1usvb_ : (CYS54) (THR149) [view usage] : d.83.2.1 |Aha1/BPI domain-like |Activator of Hsp90 ATPase, Aha1 |Activator of Hsp90 ATPase, Aha1 |Activator of Hsp90 ATPase, Aha1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1s31a_ : (SER476) (SER556) [view usage] : d.23.1.1 |Tubby C-terminal domain-like |Tubby C-terminal domain-like |Transcriptional factor tubby, C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3hiqa_ : (LEU52) (LEU104) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Common soapwort (Saponaria officinalis) [TaxId: 3572]
d1qi7a_ : (PHE50) (PRO104) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Saporin So6 |Common soapwort (Saponaria officinalis) [TaxId: 3572]
d2jc7a_ : (ILE207) (GLY273) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d2ynwb_ : (LEU42) (GLY105) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1a7ta_ : (ASP10) (HIS72) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
d1e5da2 : (GLN2) (SER65) [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain |Desulfovibrio gigas [TaxId: 879]
d3d9ya_ : (ILE71) (GLY125) [view usage] : d.110.1.0 |Profilin-like |Profilin (actin-binding protein) |automated matches |automated matches |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d3osea_ : (CYS730) (LEU793) [view usage] : d.129.6.1 |TBP-like |KA1-like |Kinase associated domain 1, KA1 |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oh2q_ : (VAL242) (VAL321) [view usage] : f.4.3.2 |Transmembrane beta-barrels |Porins |Maltoporin-like |Sucrose-specific porin |Salmonella typhimurium [TaxId: 90371]
d3paga_ : (ILE207) (GLY273) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d4f94a_ : (ILE207) (GLY273) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d4arha_ : (LYS104) (LEU167) [view usage] : b.60.1.4 |Lipocalins |Lipocalins |Hypothetical protein YodA |automated matches |Salmonella enterica [TaxId: 440534]
d3m1ba1 : (LEU7) (GLY83) [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3hiqb_ : (LEU52) (LEU104) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Common soapwort (Saponaria officinalis) [TaxId: 3572]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, d.157, d.165, d.129, f.4, b.60, d.110, c.43, b.84, d.19, d.83, d.23, d.107