Protein Concepts Dictionary

Tableau information

Concept source:  d3odoa2  amino acid (a.a.) range (PRO706)(SER761)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO706)  (THR711) E1
	  (SER712)  (GLU717) E2
	  (LYS723)  (ASP732) E3
	  (GLU734)  (GLN743) E4
	  (THR744)  (SER761) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2     -109.0°   E2                          
E3       66.8°  159.6°   E3                   
E4     -111.8°  -40.6°  159.7°   E4            
H5      -52.4° -161.0°   20.6°  142.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1btna_ :    (PRO55)  (ALA106)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |beta-spectrin |Mouse (Mus musculus), brain [TaxId: 10090]
 d2vkia_ :   (LYS495)  (ARG546)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2uzsa_ :    (LEU52)  (GLU116)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2coca1 :    (ARG51)  (HIS106)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |FYVE, RhoGEF and PH domain containing protein 3, FGD3 |Human (Homo sapiens) [TaxId: 9606]
 d1wjma_ :    (VAL63)  (GLY119)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |beta-spectrin |Human (Homo sapiens), brain 2 isoform [TaxId: 9606]
 d2d9xa_ :    (ARG52)  (ILE110)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1v88a_ :    (GLY48)  (LYS124)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) |Human (Homo sapiens) [TaxId: 9606]
 d1h10a_ :    (LEU52)  (GLU116)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Rac-alpha serine/threonine kinase |Human (Homo sapiens) [TaxId: 9606]
 d1plsa_ :    (LYS45)  (LEU106)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Pleckstrin |Human (Homo sapiens) [TaxId: 9606]
 d1zc4b1 :   (MET215)  (GLN283)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Exocyst complex protein EXO84 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1w1ha_ :   (LYS495)  (GLN548)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
 d2uvma_ :    (LEU52)  (GLU115)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2d2qb2 :   (LYS237)  (LYS296)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2dkpa_ :    (LEU62)  (VAL120)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1w1hd_ :   (LYS495)  (GLN548)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
 d4hhva_ :    (ARG66)  (GLU118)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2y8fa_ :   (ASN388)  (ARG446)   [view usage] : b.55.1.3 |PH domain-like barrel |PH domain-like |Ran-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1x1ga1 :    (VAL61)  (THR123)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Pleckstrin-2 |Human (Homo sapiens) [TaxId: 9606]
 d1egxa_ :    (CYS64)  (GLY115)   [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |Vasodilator-stimulated phosphoprotein (VASP) |Human (Homo sapiens) [TaxId: 9606]
 d1w1da_ :   (LYS495)  (ARG546)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
 d3syxa_ :    (GLU73)  (ILE123)   [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |Sprouty-related, EVH1 domain-containing protein 1, Spred-1 |Human (Homo sapiens) [TaxId: 9606]
 d1unqa_ :    (LEU52)  (GLU116)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Rac-alpha serine/threonine kinase |Human (Homo sapiens) [TaxId: 9606]
 d1w1hb_ :   (LYS495)  (PRO551)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
 d3odoa2 :   (PRO706)  (SER761)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hhvb_ :    (ARG66)  (GLY120)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1w1hc_ :   (LYS495)  (GLN548)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
 d4l6ea_ :  (CYS2982) (GLN3048)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.55