Tableau information
Concept source: d1cvwl_ amino acid (a.a.) range (GLN100)(ARG144)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN100) (THR106) E1
(THR108) (CYS114) E2
(GLY117) (ALA122) E3
(VAL125) (PRO129) E4
(ILE138) (ARG144) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 152.0° E2
E3 -55.4° 142.9° E3
E4 142.2° -10.4° 142.9° E4
H5 -95.8° -100.7° 42.5° -102.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1t09a_ : (THR142) (GLY204) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |NADP-dependent isocitrate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d1c2ba_ : (LEU9) (ASN87) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Acetylcholinesterase |Electric eel (Electrophorus electricus) [TaxId: 8005]
d4tpka_ : (ASP3) (ASN83) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1st0a2 : (SER45) (THR99) [view usage] : d.246.1.1 |mRNA decapping enzyme DcpS N-terminal domain |mRNA decapping enzyme DcpS N-terminal domain |mRNA decapping enzyme DcpS N-terminal domain |mRNA decapping enzyme DcpS N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1cvwl_ : (GLN100) (ARG144) [view usage] : g.3.11.1 |Knottins (small inhibitors, toxins, lectins) |EGF/Laminin |EGF-type module |Coagulation factor VIIa |Human (Homo sapiens) [TaxId: 9606]
d1jbul_ : (GLN100) (LYS143) [view usage] : g.3.11.1 |Knottins (small inhibitors, toxins, lectins) |EGF/Laminin |EGF-type module |Coagulation factor VIIa |Human (Homo sapiens) [TaxId: 9606]
d4a16a_ : (LEU9) (ASN87) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1oyga_ : (GLY81) (ASP147) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus subtilis [TaxId: 1423]
d4aqdb_ : (ILE4) (ASN83) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kljl_ : (GLN100) (ARG144) [view usage] : g.3.11.1 |Knottins (small inhibitors, toxins, lectins) |EGF/Laminin |EGF-type module |Coagulation factor VIIa |Human (Homo sapiens) [TaxId: 9606]
d1cwpb_ : (ARG90) (ALA152) [view usage] : b.121.4.5 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Bromoviridae-like VP |Cucumovirus coat protein |Cowpea chlorotic mottle virus [TaxId: 12303]
d2k5qa1 : (LYS47) (LEU94) [view usage] : b.40.13.1 |OB-fold |BC4932-like |BC4932-like |Uncharacterized protein BC4932 |Bacillus cereus [TaxId: 1396]
d1maaa_ : (LEU9) (ASN87) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Acetylcholinesterase |Mouse (Mus musculus) [TaxId: 10090]
d2joda1 : (THR62) (THR122) [view usage] : g.76.1.1 |Hormone receptor domain |Hormone receptor domain |Hormone receptor domain |Pituitary adenylate cyclase-activating polypeptide type I receptor |Human (Homo sapiens) [TaxId: 9606]
d1sgta_ : (GLU180) (LEU245) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Trypsin |Streptomyces griseus, strain k1 [TaxId: 1911]
d1fakl2 : (GLN100) (LYS143) [view usage] : g.3.11.1 |Knottins (small inhibitors, toxins, lectins) |EGF/Laminin |EGF-type module |Coagulation factor VIIa |Human (Homo sapiens) [TaxId: 9606]
d2zchp_ : (PHE179) (ASN245) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qlda2 : (CYS269) (VAL333) [view usage] : b.4.1.0 |HSP40/DnaJ peptide-binding domain |HSP40/DnaJ peptide-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vlra2 : (SER44) (GLY99) [view usage] : d.246.1.1 |mRNA decapping enzyme DcpS N-terminal domain |mRNA decapping enzyme DcpS N-terminal domain |mRNA decapping enzyme DcpS N-terminal domain |mRNA decapping enzyme DcpS N-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1hxta_ : (GLY135) (GLN203) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Escherichia coli, different sequences [TaxId: 562]
d1fona_ : (THR171) (ASN240) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Procarboxypeptidase A-S6 subunit III (zymogen E) |Cow (Bos taurus) [TaxId: 9913]
d1khre_ : (SER36) (GLY95) [view usage] : b.81.1.3 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Galactoside acetyltransferase-like |Xenobiotic acetyltransferase |Enterococcus faecium, VAT(D) [TaxId: 1352]
d1qfkl2 : (GLN100) (ARG144) [view usage] : g.3.11.1 |Knottins (small inhibitors, toxins, lectins) |EGF/Laminin |EGF-type module |Coagulation factor VIIa |Human (Homo sapiens) [TaxId: 9606]
d3u5et_ : (GLY59) (GLY123) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d1p91a_ : (PRO11) (ALA64) [view usage] : c.66.1.33 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA methyltransferase RlmA |rRNA methyltransferase RlmA |Escherichia coli [TaxId: 562]
d1q3xa1 : (ASN615) (PHE686) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1cwpa_ : (LEU92) (ALA152) [view usage] : b.121.4.5 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Bromoviridae-like VP |Cucumovirus coat protein |Cowpea chlorotic mottle virus [TaxId: 12303]
d1a5ia_ : (ASN179) (ASN241) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Single chain tissue plasminogen activator |Vampire bat (Desmodus rotundus) [TaxId: 9430]
d1klil_ : (GLN100) (ARG144) [view usage] : g.3.11.1 |Knottins (small inhibitors, toxins, lectins) |EGF/Laminin |EGF-type module |Coagulation factor VIIa |Human (Homo sapiens) [TaxId: 9606]
d1pytc_ : (THR579) (ASN645) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Procarboxypeptidase A-S6 subunit III (zymogen E) |Cow (Bos taurus) [TaxId: 9913]
d2deqa1 : (ASP40) (LYS77) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain |Pyrococcus horikoshii [TaxId: 53953]
d1pfxl2 : (GLN97) (HIS139) [view usage] : g.3.11.1 |Knottins (small inhibitors, toxins, lectins) |EGF/Laminin |EGF-type module |Factor IX (IXa) |Pig (Sus scrofa) [TaxId: 9823]
d1maad_ : (LEU9) (ASN87) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Acetylcholinesterase |Mouse (Mus musculus) [TaxId: 10090]
d1tw0b_ : (GLN38) (GLU95) [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |automated matches |Pachyrhizus erosus [TaxId: 109171]
d2djza1 : (ASP40) (LEU75) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain |Pyrococcus horikoshii [TaxId: 53953]
d3agxa2 : (CYS269) (VAL337) [view usage] : b.4.1.0 |HSP40/DnaJ peptide-binding domain |HSP40/DnaJ peptide-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3d3rb_ : (MSE1) (GLU76) [view usage] : b.40.14.1 |OB-fold |HupF/HypC-like |HupF/HypC-like |Hydrogenase expression/formation protein HypC |Shewanella oneidensis [TaxId: 70863]
d2aexa_ : (GLY173) (GLY226) [view usage] : d.248.1.0 |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, b.81, i.1, b.67, b.47, c.66, c.77, d.129, f.4, b.40, d.104, b.121, d.248, g.3, b.4, d.246, g.76