Tableau information
Concept source: d4af6a1 amino acid (a.a.) range (PRO31)(SER90)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO31) (ARG35) E1
(LEU37) (LYS41) E2
(GLY49) (GLU59) E3
(GLN68) (PRO74) E4
(LYS85) (SER90) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -78.9° E2
E3 102.6° 171.0° E3
E4 -82.9° -90.7° 98.3° E4
E5 64.3° 78.0° -94.6° 146.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2w7ub_ : (GLY59) (GLY133) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d1jnvd_ : (UNK9) (UNK49) [view usage] : i.3.1.1 |ATP synthase |ATP synthase |ATP synthase |ATP synthase |Escherichia coli [TaxId: 562]
d2cr6a_ : (ARG12) (ALA56) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1d8se_ : (UNK9) (UNK49) [view usage] : i.3.1.1 |ATP synthase |ATP synthase |ATP synthase |ATP synthase |Escherichia coli [TaxId: 562]
d1m7sb_ : (GLY106) (ILE157) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Pseudomonas syringae [TaxId: 317]
d4af6a1 : (PRO31) (SER90) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
d1sgde_ : (THR83) (GLY160) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Protease B |Streptomyces griseus, strain k1 [TaxId: 1911]
d1qo1d_ : (THR9) (VAL49) [view usage] : i.3.1.1 |ATP synthase |ATP synthase |ATP synthase |ATP synthase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4eh1a1 : (ARG5) (HIS62) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d3fpka1 : (ALA2) (ALA51) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d2bgja1 : (ASP17) (ALA65) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Rhodobacter capsulatus [TaxId: 1061]
d1vloa1 : (GLN307) (LYS350) [view usage] : b.44.2.1 |Elongation factor/aminomethyltransferase common domain |Aminomethyltransferase beta-barrel domain |Aminomethyltransferase beta-barrel domain |Glycine cleavage system T protein, GcvT |Escherichia coli [TaxId: 562]
d2g9da1 : (ASP298) (ASP342) [view usage] : c.56.5.7 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |AstE/AspA-like |Succinylglutamate desuccinylase AstE |Vibrio cholerae [TaxId: 666]
d2qe7a1 : (GLU27) (ASN65) [view usage] : b.49.1.0 |Domain of alpha and beta subunits of F1 ATP synthase-like |N-terminal domain of alpha and beta subunits of F1 ATP synthase |automated matches |automated matches |Bacillus sp. [TaxId: 90973]
d1qo1e_ : (THR9) (VAL49) [view usage] : i.3.1.1 |ATP synthase |ATP synthase |ATP synthase |ATP synthase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3a8kc2 : (ASN305) (LYS349) [view usage] : b.44.2.0 |Elongation factor/aminomethyltransferase common domain |Aminomethyltransferase beta-barrel domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3do7b2 : (ASN227) (ASP275) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1h4hb_ : (LYS175) (ILE209) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
d3a8ia2 : (ASN305) (LYS349) [view usage] : b.44.2.0 |Elongation factor/aminomethyltransferase common domain |Aminomethyltransferase beta-barrel domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.5, b.29, b.47, c.56, b.1, b.43, b.49, b.44, i.3