Protein Concepts Dictionary

Tableau information

Concept source:  d2w10b_  amino acid (a.a.) range (ARG6)(ARG62)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG6)   (TYR12) E1
	   (TYR12)   (GLU18) E2
	   (ASP20)   (ARG25) E3
	   (GLU28)   (LEU33) E4
	   (TYR56)   (ARG62) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2       96.8°   E2                          
E3      -64.3° -149.9°   E3                   
E4      139.9°   57.4° -150.8°   E4            
E5      140.4° -119.0°   76.1°  -78.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qkxa_ :     (GLU7)   (ASP62)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
 d1tuda_ :     (GLU7)   (ASN47)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
 d1wyxa_ :     (VAL4)   (GLY63)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2rqta_ :  (ARG1070) (SER1128)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2w10b_ :     (ARG6)   (ARG62)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1oebb_ :     (TRP3)   (MET57)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Grb2-related adaptor protein 2 (Mona/Gads) |Mouse (Mus musculus) [TaxId: 10090]
 d2crea_ :     (LEU8)   (GLY67)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ct3a_ :     (THR8)   (SER65)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1k9ab1 :    (THR12)   (GLY70)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Carboxyl-terminal src kinase (csk) |Human (Homo sapiens) [TaxId: 9606]
 d2w10a_ :     (ARG6)   (MET61)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1uffa_ :     (SER6)   (SER64)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Intersectin 2 (KIAA1256) |Human (Homo sapiens) [TaxId: 9606]
 d1e6ga_ :     (GLU7)   (ASP62)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
 d2yuoa_ :     (ARG8)   (ASP63)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2f2va_ :     (GLU7)   (ASP62)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
 d4glmb_ :   (LEU245)  (PRO301)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.34