Tableau information
Concept source: d1c9ub_ amino acid (a.a.) range (HIS30)(GLU68)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS30) (TRP34) E1
(GLN39) (ARG45) E2
(GLY48) (ASN54) E3
(GLY58) (THR62) E4
(VAL63) (GLU68) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.8° E2
E3 -37.8° 156.2° E3
E4 115.3° -52.7° 148.7° E4
E5 144.2° -21.7° 171.3° -38.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4knsa2 : (TRP202) (GLY255) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Nitrosomonas europaea [TaxId: 228410]
d1b9sa_ : (TRP408) (ALA465) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza B virus, different strains [TaxId: 11520]
d1uypa2 : (GLY13) (PRO66) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |Beta-fructosidase (invertase), N-terminal domain |Thermotoga maritima [TaxId: 2336]
d3ivma1 : (GLY368) (PRO414) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d3pyja_ : (CYS41) (PRO92) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |Monellin, B & A chains together |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d2p4oa1 : (ASN35) (GLU70) [view usage] : b.68.6.3 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |All0351-like |Hypothetical protein All0351 homologue |Nostoc punctiforme [TaxId: 272131]
d1roca_ : (GLY68) (ASN150) [view usage] : b.1.22.1 |Immunoglobulin-like beta-sandwich |ASF1-like |ASF1-like |Anti-silencing protein 1, ASF1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2h2ub_ : (PRO25) (LEU88) [view usage] : b.67.3.1 |5-bladed beta-propeller |Apyrase |Apyrase |Soluble calcium-activated nucleotidase SCAN-1 |Human (Homo sapiens) [TaxId: 9606]
d2h2ub_ : (SER98) (ASP133) [view usage] : b.67.3.1 |5-bladed beta-propeller |Apyrase |Apyrase |Soluble calcium-activated nucleotidase SCAN-1 |Human (Homo sapiens) [TaxId: 9606]
d1c9ub_ : (HIS30) (GLU68) [view usage] : b.68.2.1 |6-bladed beta-propeller |Soluble quinoprotein glucose dehydrogenase |Soluble quinoprotein glucose dehydrogenase |Soluble quinoprotein glucose dehydrogenase |Acinetobacter calcoaceticus [TaxId: 471]
d3eq9a1 : (ARG128) (ARG170) [view usage] : b.69.7.1 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Prolyl oligopeptidase, N-terminal domain |Prolyl oligopeptidase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1ajoa_ : (ALA44) (GLY111) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Bacillus macerans [TaxId: 44252]
d3umna_ : (ILE432) (LYS474) [view usage] : b.1.16.0 |Immunoglobulin-like beta-sandwich |Lamin A/C globular tail domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fk6a1 : (TYR113) (LEU158) [view usage] : d.157.1.7 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |RNase Z-like |Ribonuclease Z (RNase Z) |Bacillus subtilis [TaxId: 1423]
d2q9ub1 : (LYS133) (HIS176) [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |Nitric oxide reductase N-terminal domain |Giardia intestinalis [TaxId: 5741]
d1iv9a_ : (MET42) (PRO92) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |Monellin, B & A chains together |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d4akmb_ : (THR268) (LEU310) [view usage] : b.180.1.1 |Pseudo beta-prism II |LAMP conserved domain-like |LAMP conserved domain |DC-LAMP |Human (Homo sapiens) [TaxId: 9606]
d2bkla1 : (GLY363) (PRO409) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Myxococcus xanthus [TaxId: 34]
d2h2ua_ : (SER98) (ASP133) [view usage] : b.67.3.1 |5-bladed beta-propeller |Apyrase |Apyrase |Soluble calcium-activated nucleotidase SCAN-1 |Human (Homo sapiens) [TaxId: 9606]
d2f09a1 : (ALA46) (GLN78) [view usage] : b.61.8.1 |Streptavidin-like |YdhA-like |YdhA-like |Hypothetical protein YdhA |Escherichia coli [TaxId: 562]
d2xzga1 : (HIS197) (PRO253) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zi7b_ : (THR134) (LYS190) [view usage] : d.338.1.1 |Oxysterol-binding protein-like |Oxysterol-binding protein-like |Oxysterol-binding protein |Oxysterol-binding protein homolog 4, KES1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3srga_ : (ASN224) (ASP265) [view usage] : b.68.6.2 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |Serum paraoxonase/arylesterase 1, PON1 |Serum paraoxonase/arylesterase 1, PON1 |Artificial gene [TaxId: 32630]
d3q2pa_ : (PRO40) (PRO92) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |automated matches |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d1w74a_ : (HIS72) (SER125) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Peptidyl-prolyl cis-trans isomerase A, PpiA |Mycobacterium tuberculosis [TaxId: 1773]
d3szkf_ : (ASP136) (PRO177) [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 196620]
d2nyya4 : (TYR1104) (THR1145) [view usage] : b.42.4.2 |beta-Trefoil |STI-like |Clostridium neurotoxins, C-terminal domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
d1n67a2 : (TYR372) (GLY414) [view usage] : b.2.3.4 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Fibrinogen-binding domain |Clumping factor A |Staphylococcus aureus [TaxId: 1280]
d1el6a_ : (ASN144) (PRO188) [view usage] : d.182.1.1 |Baseplate structural protein gp11 |Baseplate structural protein gp11 |Baseplate structural protein gp11 |Baseplate structural protein gp11 |Bacteriophage T4 [TaxId: 10665]
d1dvca_ : (VAL48) (ASP115) [view usage] : d.17.1.2 |Cystatin-like |Cystatin/monellin |Cystatins |Cystatin A (stefin A) |Human (Homo sapiens) [TaxId: 9606]
d3muna1 : (GLY368) (PRO414) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d1mola_ : (MET42) (PRO90) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |Monellin, B & A chains together |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d3iuna1 : (GLY368) (ALA413) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d1s18a_ : (PRO25) (HIS87) [view usage] : b.67.3.1 |5-bladed beta-propeller |Apyrase |Apyrase |Soluble calcium-activated nucleotidase SCAN-1 |Human (Homo sapiens) [TaxId: 9606]
d1gvia1 : (ILE6) (GLY66) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Maltogenic amylase, N-terminal domain N |Thermus sp. [TaxId: 275]
d1hpwa_ : (VAL78) (THR147) [view usage] : d.24.1.1 |Pili subunits |Pili subunits |Pilin |Pilin P1 |Pseudomonas aeruginosa [TaxId: 287]
d2dwyb_ : (ASN511) (PRO565) [view usage] : b.1.10.2 |Immunoglobulin-like beta-sandwich |Clathrin adaptor appendage domain |gamma-adaptin C-terminal appendage domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3eq7a1 : (ARG128) (ARG170) [view usage] : b.69.7.1 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Prolyl oligopeptidase, N-terminal domain |Prolyl oligopeptidase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1ri6a_ : (ARG280) (GLY322) [view usage] : b.69.11.1 |7-bladed beta-propeller |Putative isomerase YbhE |Putative isomerase YbhE |Putative isomerase YbhE |Escherichia coli [TaxId: 562]
d1j2ea1 : (ASP297) (THR351) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1gyhd_ : (ALA95) (PRO149) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |alpha-L-arabinanase |Cellvibrio cellulosa [TaxId: 155077]
d1jofa_ : (ARG196) (ILE239) [view usage] : b.69.10.1 |7-bladed beta-propeller |3-carboxy-cis,cis-mucoante lactonizing enzyme |3-carboxy-cis,cis-mucoante lactonizing enzyme |3-carboxy-cis,cis-mucoante lactonizing enzyme |Fungus (Neurospora crassa) [TaxId: 5141]
d1jofa_ : (ALA313) (PRO353) [view usage] : b.69.10.1 |7-bladed beta-propeller |3-carboxy-cis,cis-mucoante lactonizing enzyme |3-carboxy-cis,cis-mucoante lactonizing enzyme |3-carboxy-cis,cis-mucoante lactonizing enzyme |Fungus (Neurospora crassa) [TaxId: 5141]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, b.69, b.29, b.67, d.157, b.2, b.6, b.1, b.42, d.17, b.62, b.61, d.24, d.338, b.180, d.182