Protein Concepts Dictionary

Tableau information

Concept source:  d1jt4a_  amino acid (a.a.) range (GLN43)(SER99)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN43)   (ALA48) E1
	   (GLU53)   (SER58) E2
	   (GLY62)   (MET67) E3
	   (LEU84)   (LEU89) E4
	   (TYR94)   (SER99) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      161.2°   E2                          
E3      -69.6°  123.0°   E3                   
E4      -94.0°  101.9°   78.9°   E4            
E5       71.5°  -95.2°  -82.3°  159.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1k5ua_ :    (GLN43)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d2nnwb_ :     (VAL2)   (ASN52)   [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Pyrococcus furiosus [TaxId: 2261]
 d1bara_ :    (GLN43)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Cow (Bos taurus) [TaxId: 9913]
 d1ii4a_ :    (LYS61)  (SER117)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d1axmb_ :    (GLN43)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1nuna_ :   (ILE110)  (SER166)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Fibroblast growth factor-10, FGF10 |Human (Homo sapiens) [TaxId: 9606]
 d2j3pb_ :    (GLN58)  (SER114)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1iild_ :    (LYS61)  (SER117)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d3ud9c_ :    (GLN43)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1barb_ :    (GLN43)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Cow (Bos taurus) [TaxId: 9913]
 d1iilc_ :    (LYS61)  (SER117)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d1k5vb_ :    (GLN43)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1e0oa_ :    (GLN43)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1g82a_ :    (ILE94)  (SER150)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Fibroblast growth factor 9, FGF9 |Human (Homo sapiens) [TaxId: 9606]
 d2j3pa_ :    (GLN58)  (SER114)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1evta_ :    (GLN43)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66,    b.42