Tableau information
Concept source: d3uwia_ amino acid (a.a.) range (GLN30)(SER84)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN30) (SER37) E1
(CYS42) (ASN48) E2
(TRP51) (ALA55) E3
(GLY62) (GLY69) E4
(ASN79) (SER84) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 123.1° E2
E3 -75.8° 148.5° E3
E4 152.5° -66.7° 109.3° E4
E5 -41.7° 100.4° -77.0° 164.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3d9wc_ : (THR101) (ASP154) [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Nocardia farcinica [TaxId: 37329]
d4e7na_ : (PHE29) (VAL84) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Halys viper (Agkistrodon halys) [TaxId: 8714]
d3mmgb_ : (CYS19) (ASN68) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Tobacco vein mottling virus [TaxId: 12228]
d1uw7a_ : (CYS14) (GLU68) [view usage] : b.140.1.1 |Replicase NSP9 |Replicase NSP9 |Replicase NSP9 |Replicase NSP9 |SARS coronavirus [TaxId: 227859]
d1bqya_ : (LEU30) (ASP84) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Venom serine protease |Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]
d3n7ka2 : (GLU1111) (GLY1164) [view usage] : b.42.4.0 |beta-Trefoil |STI-like |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
d1qz8b_ : (CYS14) (GLU68) [view usage] : b.140.1.1 |Replicase NSP9 |Replicase NSP9 |Replicase NSP9 |Replicase NSP9 |SARS coronavirus [TaxId: 227859]
d3u5ce_ : (SER120) (ASP176) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d1y12c_ : (LEU98) (ASN155) [view usage] : b.157.1.1 |Hcp1-like |Hcp1-like |Hcp1-like |Hemolysin-corregulated protein 1, Hcp1 |Pseudomonas aeruginosa [TaxId: 287]
d1oq1c_ : (TRP22) (GLU70) [view usage] : b.29.1.17 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Hypothetical protein YesU |Hypothetical protein YesU |Bacillus subtilis [TaxId: 1423]
d1wbca_ : (THR17) (LYS103) [view usage] : b.42.4.1 |beta-Trefoil |STI-like |Kunitz (STI) inhibitors |chymotrypsin inhibitor WCI |Winged bean (Psophocarpus tetragonolobus) [TaxId: 3891]
d4aryb3 : (ASN480) (VAL536) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Bacillus thuringiensis [TaxId: 29339]
d3kcgh_ : (GLN30) (ASN84) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor IXa, protease domain |Human (Homo sapiens) [TaxId: 9606]
d3fd4b_ : (ASN173) (GLN219) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human herpesvirus 4 (strain b95-8) [TaxId: 10377]
d2zchp_ : (GLN30) (GLN84) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3wmsa3 : (THR557) (ASN606) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Paenibacillus macerans [TaxId: 44252]
d3izbd_ : (SER120) (PHE175) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1qz8a_ : (CYS14) (GLU68) [view usage] : b.140.1.1 |Replicase NSP9 |Replicase NSP9 |Replicase NSP9 |Replicase NSP9 |SARS coronavirus [TaxId: 227859]
d1lvmb_ : (HIS20) (ASN68) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |TEV protease (nucleat inclusion protein A, NIA) |Tobacco etch virus, TEV [TaxId: 12227]
d1gvza_ : (GLN30) (GLN84) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Prostate specific antigen (PSA kallikrein) |Horse (Equus caballus) [TaxId: 9796]
d4oitb_ : (ALA7) (ALA69) [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1fn8a_ : (PHE29) (SER84) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Fungus (Fusarium oxysporum) [TaxId: 5507]
d2ouaa_ : (LEU33) (VAL87) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Nocardiopsis alba [TaxId: 53437]
d3hupa_ : (GLY144) (GLU185) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3d9wb_ : (THR101) (ASP154) [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Nocardia farcinica [TaxId: 37329]
d4p8qa1 : (ARG218) (SER270) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
i.1, b.29, b.47, b.18, d.169, d.3, b.1, b.42, b.98, b.78, b.140, b.157