Tableau information
Concept source: d1b6ua2 amino acid (a.a.) range (PRO108)(LEU166)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO108) (ALA112) E1
(SER123) (SER129) E2
(ASP135) (ARG141) E3
(HIS146) (SER151) E4
(PHE160) (LEU166) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 160.7° E2
E3 -54.2° 133.7° E3
E4 106.4° -60.6° 157.0° E4
E5 -39.3° 157.8° -31.0° 140.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1g9ea_ : (GLN3) (SER62) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Llama (Lama glama) [TaxId: 9844]
d2dl2a2 : (LYS107) (LEU166) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Killer cell inhibitory receptor |Human (Homo sapiens), 2dl2 [TaxId: 9606]
d2vh9a_ : (GLN32) (SER79) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Tropaeolum majus [TaxId: 4020]
d1l3wa4 : (ALA329) (GLY390) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |C-cadherin ectodomain |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1j9ct2 : (GLN110) (ASP178) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Extracellular region of human tissue factor |Human (Homo sapiens) [TaxId: 9606]
d1tdqa3 : (LEU186) (ASP243) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Tenascin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ti2b1 : (VAL224) (LEU274) [view usage] : b.3.5.1 |Prealbumin-like |Cna protein B-type domain |Cna protein B-type domain |Transhydroxylase beta subunit, BthL, C-terminal domain |Pelobacter acidigallici [TaxId: 35816]
d4k71b2 : (GLU178) (LEU240) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3sudc_ : (PHE1043) (GLN1086) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
d1p9mc1 : (GLN99) (ALA160) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interleukin-6 receptor alpha chain, domains 2 and 3 |Human (Homo sapiens) [TaxId: 9606]
d2vxqa_ : (LYS3) (GLU57) [view usage] : b.7.3.1 |C2 domain-like |PHL pollen allergen |PHL pollen allergen |automated matches |Timothy grass (Phleum pratense) [TaxId: 15957]
d1q55a_ : (VAL326) (GLY390) [view usage] : i.20.1.1 |Ep-cadherin |Ep-cadherin |Ep-cadherin |Ep-cadherin |Mouse (Mus musculus) [TaxId: 10090]
d4h8wc2 : (PHE98) (VAL146) [view usage] : b.1.1.3 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C2 set domains |CD4 C2-set domains |Human (Homo sapiens) [TaxId: 9606]
d1pkqb1 : (LYS3) (ASN60) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d1ug9a3 : (PHE806) (GLU867) [view usage] : b.1.9.3 |Immunoglobulin-like beta-sandwich |CBD9-like |Glucodextranase, domain C |Glucodextranase, domain C |Arthrobacter globiformis [TaxId: 1665]
d1frta1 : (GLU180) (GLU243) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Fc (IgG) receptor, alpha-3 domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1fnfa2 : (VAL1236) (ASN1296) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Human (Homo sapiens) [TaxId: 9606]
d2diaa1 : (LYS13) (THR76) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
d2aiha_ : (ASP10) (CYS50) [view usage] : g.3.13.0 |Knottins (small inhibitors, toxins, lectins) |Bowman-Birk inhibitor, BBI |automated matches |automated matches |Common lentil (Lens culinaris) [TaxId: 3864]
d2gi7a1 : (SER2) (ALA57) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ls2a_ : (ILE5) (ASP58) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pseudoalteromonas haloplanktis [TaxId: 326442]
d1owwa_ : (VAL4) (GLY62) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Human (Homo sapiens) [TaxId: 9606]
d2d9qb3 : (HIS104) (PRO166) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Granulocyte colony-stimulating factor (GC-SF) receptor |Human (Homo sapiens) [TaxId: 9606]
d1tg7a1 : (ASN616) (THR666) [view usage] : b.149.1.1 |Beta-galactosidase LacA, domain 3 |Beta-galactosidase LacA, domain 3 |Beta-galactosidase LacA, domain 3 |Beta-galactosidase LacA, domain 3 |Penicillium sp. [TaxId: 5081]
d3ft9a_ : (VAL2) (SER58) [view usage] : b.7.3.0 |C2 domain-like |PHL pollen allergen |automated matches |automated matches |Timothy grass (Phleum pratense) [TaxId: 15957]
d3h8na2 : (GLU106) (GLY167) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j86b2 : (TRP87) (THR139) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |IgE high affinity receptor alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d1a4yb_ : (ASN61) (ALA106) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
d4ixlb_ : (GLY77) (GLN130) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |automated matches |Bacillus sp [TaxId: 1409]
d1m4ka2 : (GLU106) (LEU166) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Killer cell inhibitory receptor |Human (Homo sapiens), kir2ds3, CD158j [TaxId: 9606]
d1do6a_ : (VAL19) (VAL96) [view usage] : b.1.13.1 |Immunoglobulin-like beta-sandwich |Superoxide reductase-like |Superoxide reductase-like |Superoxide reductase (SOR) |Pyrococcus furiosus [TaxId: 2261]
d1m4ka1 : (PRO8) (SER65) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Killer cell inhibitory receptor |Human (Homo sapiens), kir2ds3, CD158j [TaxId: 9606]
d3d7eo2 : (MET261) (VAL309) [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
d4lpwb_ : (LEU2) (GLY61) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Artificial gene [TaxId: 32630]
d1gh7a4 : (ASN319) (GLU385) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors |Human (Homo sapiens) [TaxId: 9606]
d1y6mr1 : (GLU4) (LEU62) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interleukin-10 receptor 1, IL-10R1 |Human (Homo sapiens) [TaxId: 9606]
d1exua1 : (SER181) (THR241) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Fc (IgG) receptor, alpha-3 domain |Human (Homo sapiens) [TaxId: 9606]
d1bp3b2 : (VAL301) (SER371) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Prolactin receptor |Human (Homo sapiens) [TaxId: 9606]
d1ieha_ : (ASP1) (ALA61) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Llama (Lama glama) [TaxId: 9844]
d4mmzc_ : (ARG1421) (GLY1476) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1im9d1 : (ARG6) (ARG68) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Killer cell inhibitory receptor |Human (Homo sapiens), p58-cl42 kir [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, b.29, b.47, c.55, b.1, d.5, b.7, b.3, i.20, g.3, b.149