Protein Concepts Dictionary

Tableau information

Concept source:  d3btaa2  amino acid (a.a.) range (LYS1158)(SER1224)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	 (LYS1158) (LYS1163) E1
	 (TYR1180) (LYS1186) E2
	 (LYS1188) (SER1197) E3
	 (VAL1201) (ALA1207) E4
	 (VAL1219) (SER1224) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      150.0°   E2                          
E3      -73.8°  125.3°   E3                   
E4      100.3°  -52.5°  156.8°   E4            
E5      -99.2°   99.4°   99.8° -103.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hcda_ :    (PHE74)  (ILE118)   [view usage] : b.42.5.2 |beta-Trefoil |Actin-crosslinking proteins |Histidine-rich actin-binding protein (hisactophilin) |Histidine-rich actin-binding protein (hisactophilin) |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d4mzaa_ :   (GLU409)  (ASN485)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Human parainfluenza 3 virus [TaxId: 11217]
 d1igqa_ :   (ALA307)  (GLU357)   [view usage] : b.34.1.3 |SH3-like barrel |C-terminal domain of transcriptional repressors |Transcriptional repressor protein KorB |Transcriptional repressor protein KorB |Escherichia coli [TaxId: 562]
 d3btaa2 :  (LYS1158) (SER1224)   [view usage] : b.42.4.2 |beta-Trefoil |STI-like |Clostridium neurotoxins, C-terminal domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
 d8i1ba_ :    (VAL40)  (LYS107)   [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |Interleukin-1beta |Mouse (Mus musculus) [TaxId: 10090]
 d4mzea_ :   (GLU409)  (ASN485)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Human parainfluenza 3 virus [TaxId: 11217]
 d1wbaa_ :   (ALA117)  (ARG171)   [view usage] : b.42.4.1 |beta-Trefoil |STI-like |Kunitz (STI) inhibitors |Winged bean albumin 1 |Winged bean (Psophocarpus tetragonolobus) [TaxId: 3891]
 d4depa_ :    (VAL41)  (ILE106)   [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1avac_ :   (ASN124)  (LYS177)   [view usage] : b.42.4.1 |beta-Trefoil |STI-like |Kunitz (STI) inhibitors |Amylase/subtilisin inhibitor |Barley (Hordeum vulgare), seed [TaxId: 4513]
 d1xg6a_ :   (VAL119)  (LYS177)   [view usage] : b.42.4.1 |beta-Trefoil |STI-like |Kunitz (STI) inhibitors |automated matches |Winged bean (Psophocarpus tetragonolobus) [TaxId: 3891]
 d3phza2 :   (LEU234)  (PHE286)   [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Polyporus squamosus [TaxId: 5640]
 d4cjmd_ :    (LYS50)   (ASP91)   [view usage] : b.42.1.0 |beta-Trefoil |Cytokine |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1s18a_ :    (SER98)  (TRP146)   [view usage] : b.67.3.1 |5-bladed beta-propeller |Apyrase |Apyrase |Soluble calcium-activated nucleotidase SCAN-1 |Human (Homo sapiens) [TaxId: 9606]
 d1igqb_ :   (LYS306)  (ALA354)   [view usage] : b.34.1.3 |SH3-like barrel |C-terminal domain of transcriptional repressors |Transcriptional repressor protein KorB |Transcriptional repressor protein KorB |Escherichia coli [TaxId: 562]
 d2iwtb_ :   (ASN124)  (LYS177)   [view usage] : b.42.4.1 |beta-Trefoil |STI-like |Kunitz (STI) inhibitors |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.68,    b.67,     d.3,    b.42,    b.34