Tableau information
Concept source: d1hn0a3 amino acid (a.a.) range (TYR900)(GLN949)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR900) (ARG904) E1
(ASP908) (ASP914) E2
(ASN918) (PHE924) E3
(LYS936) (LYS940) E4
(ILE943) (GLN949) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.3° E2
E3 -23.9° 170.2° E3
E4 -66.7° 125.7° -44.7° E4
E5 137.2° -28.2° 160.8° 148.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1gcya1 : (ALA362) (SER418) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]
d2xyaa_ : (CYS16) (LYS76) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human rhinovirus sp. [TaxId: 169066]
d1aohb_ : (ILE8) (GLU86) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cohesin domain |Clostridium thermocellum, cellulosome, various modules [TaxId: 1515]
d4eq3a2 : (LYS155) (ALA196) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1d8ta2 : (GLU348) (VAL388) [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor Tu (EF-Tu) |Escherichia coli [TaxId: 562]
d1klfb1 : (PHE1) (ASP37) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |Mannose-specific adhesin FimH |Escherichia coli [TaxId: 562]
d1vf5d1 : (GLY130) (THR163) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |ISP subunit from the cytochrome b6f complex, soluble domain |Mastigocladus laminosus [TaxId: 83541]
d2nqda_ : (SER2) (PHE73) [view usage] : b.1.26.1 |Immunoglobulin-like beta-sandwich |ICP-like |ICP-like |Chagasin |Trypanosoma cruzi [TaxId: 5693]
d3bsga1 : (ALA353) (LYS404) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
d2h7wa1 : (HIS3) (PHE73) [view usage] : b.1.26.1 |Immunoglobulin-like beta-sandwich |ICP-like |ICP-like |Chagasin |Trypanosoma cruzi [TaxId: 5693]
d1hn0a3 : (TYR900) (GLN949) [view usage] : b.24.1.1 |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase-like, C-terminal domain |Chondroitin ABC lyase I |Proteus vulgaris [TaxId: 585]
d2id0a1 : (LEU601) (PRO642) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Exoribonuclease 2, RNB |Escherichia coli [TaxId: 562]
d1szba1 : (VAL11) (SER66) [view usage] : b.23.1.1 |CUB-like |Spermadhesin, CUB domain |Spermadhesin, CUB domain |Mannose-binding protein associated serine protease 2, MASP2 |Human (Homo sapiens) [TaxId: 9606]
d2h7wb_ : (HIS3) (PHE73) [view usage] : b.1.26.1 |Immunoglobulin-like beta-sandwich |ICP-like |ICP-like |Chagasin |Trypanosoma cruzi [TaxId: 5693]
d3qzna_ : (GLN124) (PHE176) [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 158879]
d4ca4a_ : (PHE1) (LEU38) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |Mannose-specific adhesin FimH |Escherichia coli [TaxId: 562]
d4lmfa1 : (MET4) (GLY60) [view usage] : b.23.1.1 |CUB-like |Spermadhesin, CUB domain |Spermadhesin, CUB domain |Complement C1S component |Human (Homo sapiens) [TaxId: 9606]
d2qpua1 : (ALA353) (LYS404) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Plant alpha-amylase |Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
d2ccla_ : (ILE80) (ASP138) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |automated matches |Clostridium thermocellum [TaxId: 1515]
d3jv1a_ : (GLY78) (VAL124) [view usage] : d.25.1.0 |Mitochondrial glycoprotein MAM33-like |Mitochondrial glycoprotein MAM33-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1rw9a2 : (LYS645) (GLY693) [view usage] : b.24.1.1 |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase-like, C-terminal domain |Chondroitinase AC |Arthrobacter aurescens [TaxId: 43663]
d1ht6a1 : (ALA353) (LYS404) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Plant alpha-amylase |Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
d1cxna_ : (LEU1) (ASN55) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |gamma-Cardiotoxin |Snake (Naja nigricollis) [TaxId: 8654]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.47, b.40, b.2, b.1, b.71, b.24, b.33, b.23, g.7, d.25, b.44