Tableau information
Concept source: d2z3rh_ amino acid (a.a.) range (HIS11)(ARG65)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS11) (LYS17) E1
(SER23) (CYS29) E2
(GLY32) (GLY38) E3
(SER41) (CYS45) E4
(ALA54) (ARG65) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 151.2° E2
E3 -81.8° 122.9° E3
E4 -42.5° 150.1° 74.7° E4
E5 139.9° -23.7° 111.2° -173.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1kcwa4 : (SER622) (TRP669) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Ceruloplasmin |Human (Homo sapiens) [TaxId: 9606]
d2qc1b_ : (ASP138) (MET207) [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1hjca_ : (PHE89) (ASP133) [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
d2rj2a_ : (ILE205) (ASP260) [view usage] : b.18.1.21 |Galactose-binding domain-like |Galactose-binding domain-like |F-box associated region, FBA |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2z3rj_ : (HIS11) (ARG65) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Interleukin-15 receptor subunit alpha |Human (Homo sapiens) [TaxId: 9606]
d3lgia_ : (VAL154) (ASN207) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1soza2 : (VAL154) (SER208) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Stress sensor protease DegS, catalytic domain |Escherichia coli [TaxId: 562]
d4msva_ : (PHE190) (ALA247) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2z3rh_ : (HIS11) (ARG65) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Interleukin-15 receptor subunit alpha |Human (Homo sapiens) [TaxId: 9606]
d2chcb_ : (GLY69) (ASN129) [view usage] : d.17.4.25 |Cystatin-like |NTF2-like |Rv3472-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d3wtwf_ : (PHE89) (ASP133) [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
d1loxa2 : (ARG64) (VAL111) [view usage] : b.12.1.1 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipoxigenase N-terminal domain |15-Lipoxygenase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2re9a_ : (PHE77) (MET146) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2z3qd_ : (HIS11) (ARG65) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Interleukin-15 receptor subunit alpha |Human (Homo sapiens) [TaxId: 9606]
d2chca1 : (GLY69) (ASN129) [view usage] : d.17.4.25 |Cystatin-like |NTF2-like |Rv3472-like |Uncharacterized protein Rv3472 |Mycobacterium tuberculosis [TaxId: 1773]
d1etha1 : (GLN397) (PRO447) [view usage] : b.12.1.2 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Colipase-binding domain |Pancreatic lipase, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d2mcza2 : (GLY72) (ASP114) [view usage] : g.18.1.0 |Complement control module/SCR domain |Complement control module/SCR domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2oj5c2 : (VAL399) (PRO451) [view usage] : b.21.1.2 |Virus attachment protein globular domain |Virus attachment protein globular domain |Reovirus attachment protein sigma 1 head domain |automated matches |Reovirus sp. [TaxId: 10891]
d2j5wa6 : (ARG261) (VAL308) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2in2a_ : (ARG133) (LYS175) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human rhinovirus 14 [TaxId: 12131]
d1ygea2 : (GLY95) (ALA145) [view usage] : b.12.1.1 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipoxigenase N-terminal domain |Plant lipoxigenase |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
d3wu1a_ : (PHE89) (ASP133) [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
d1rwra_ : (LEU92) (THR125) [view usage] : b.80.1.11 |Single-stranded right-handed beta-helix |Pectin lyase-like |Filamentous hemagglutinin FhaB, secretion domain |Filamentous hemagglutinin FhaB, secretion domain |Bordetella pertussis [TaxId: 520]
d4b96a_ : (ASN52) (ARG109) [view usage] : b.2.2.0 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |automated matches |automated matches |Clostridium clariflavum [TaxId: 288965]
d4gs7d_ : (HIS11) (ARG65) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Interleukin-15 receptor subunit alpha |Human (Homo sapiens) [TaxId: 9606]
d2ra2a1 : (PRO4) (GLU55) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |Uncharacterized protein YgdI |Salmonella typhimurium [TaxId: 90371]
d2jc4a_ : (GLY51) (THR95) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Neisseria meningitidis [TaxId: 487]
d2r3ya2 : (VAL154) (SER208) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Stress sensor protease DegS, catalytic domain |Escherichia coli [TaxId: 562]
d2z3rd_ : (HIS11) (ARG65) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Interleukin-15 receptor subunit alpha |Human (Homo sapiens) [TaxId: 9606]
d1tvga_ : (GLU60) (VAL106) [view usage] : b.18.1.9 |Galactose-binding domain-like |Galactose-binding domain-like |APC10-like |Placental protein 25, pp25 |Human (Homo sapiens) [TaxId: 9606]
d2chcc_ : (GLY69) (ASN129) [view usage] : d.17.4.25 |Cystatin-like |NTF2-like |Rv3472-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1xmwa2 : (ALA113) (CYS163) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |CD3 epsilon chain ectodomain fragment |Sheep (Ovis aries) [TaxId: 9940]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, b.47, d.151, b.18, b.2, b.6, b.1, b.96, d.17, b.21, b.22, b.38, g.18, b.12