Tableau information
Concept source: d4eq3a1 amino acid (a.a.) range (VAL19)(LEU95)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL19) (PRO25) E1
(GLU29) (PRO39) E2
(THR57) (LEU61) E3
(HIS70) (GLY81) E4
(SER82) (LEU95) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 143.9° E2
E3 160.7° -21.2° E3
E4 -32.2° 158.7° 150.0° E4
E5 143.3° -40.3° -43.9° 160.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1hd8a1 : (ASP295) (GLN350) [view usage] : b.105.1.1 |Penicillin-binding protein associated domain |Penicillin-binding protein associated domain |PBP5 C-terminal domain-like |Penicillin-binding protein 5, C-terminal domain |Escherichia coli [TaxId: 562]
d2v0ra_ : (THR192) (LEU239) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bgfc_ : (ARG87) (LEU141) [view usage] : d.3.1.5 |Cysteine proteinases |Cysteine proteinases |Arylamine N-acetyltransferase |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2h6bb2 : (GLY59) (ALA98) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
d1uypa2 : (THR70) (LYS118) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |Beta-fructosidase (invertase), N-terminal domain |Thermotoga maritima [TaxId: 2336]
d4eq2a1 : (THR18) (LEU95) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d4mzab_ : (LEU181) (GLY227) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Human parainfluenza 3 virus [TaxId: 11217]
d3o4gb1 : (LEU187) (ARG226) [view usage] : b.69.7.2 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Acylamino-acid-releasing enzyme, N-terminal donain |Acylamino-acid-releasing enzyme, N-terminal donain |Aeropyrum pernix [TaxId: 56636]
d3k5sa2 : (ARG128) (THR172) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2axwb_ : (GLU49) (CYS116) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |Invasin AfaD |Escherichia coli [TaxId: 562]
d4eq3a1 : (VAL19) (LEU95) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d4mzea_ : (GLY529) (SER572) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Human parainfluenza 3 virus [TaxId: 11217]
d1dyoa_ : (THR100) (GLU150) [view usage] : b.18.1.7 |Galactose-binding domain-like |Galactose-binding domain-like |CBM22 |Xylan-binding domain |Clostridium thermocellum [TaxId: 1515]
d2w9pa_ : (LEU41) (GLU86) [view usage] : d.17.1.0 |Cystatin-like |Cystatin/monellin |automated matches |automated matches |Potato (Solanum tuberosum) [TaxId: 4113]
d2axwa1 : (ARG50) (GLU121) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |Invasin AfaD |Escherichia coli [TaxId: 562]
d2h3ka1 : (LYS72) (ILE119) [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |Iron-regulated surface determinant protein H, IsdH |Staphylococcus aureus [TaxId: 1280]
d3myrd_ : (GLN1325) (TRP1381) [view usage] : e.18.1.0 |HydB/Nqo4-like |HydB/Nqo4-like |automated matches |automated matches |Allochromatium vinosum [TaxId: 1049]
d1plaa_ : (GLU25) (VAL96) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Plastocyanin |Parsley (Petroselinum crispum) [TaxId: 4043]
d1e5ui1 : (GLY28) (ILE84) [view usage] : b.1.14.1 |Immunoglobulin-like beta-sandwich |Invasin/intimin cell-adhesion fragments |Invasin/intimin cell-adhesion fragments |Intimin |Escherichia coli [TaxId: 562]
d2v0rb_ : (THR192) (LEU239) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1h03p2 : (ILE67) (GLY105) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
d3qi0a_ : (HIS114) (GLY166) [view usage] : b.69.5.2 |7-bladed beta-propeller |RCC1/BLIP-II |beta-lactamase inhibitor protein-II, BLIP-II |automated matches |Streptomyces exfoliatus [TaxId: 1905]
d1ylbb_ : (GLU25) (VAL98) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
d1i3qc2 : (LEU99) (LYS161) [view usage] : d.181.1.1 |Insert subdomain of RNA polymerase alpha subunit |Insert subdomain of RNA polymerase alpha subunit |Insert subdomain of RNA polymerase alpha subunit |RPB3 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1a47a2 : (ASN582) (GLU660) [view usage] : b.3.1.1 |Prealbumin-like |Starch-binding domain-like |Starch-binding domain |Cyclodextrin glycosyltransferase, C-terminal domain |Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId: 33950]
d3myrb_ : (ILE1324) (TRP1381) [view usage] : e.18.1.0 |HydB/Nqo4-like |HydB/Nqo4-like |automated matches |automated matches |Allochromatium vinosum [TaxId: 1049]
d1tega_ : (GLU25) (ASN99) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Plastocyanin |Spinach (Spinacia oleracea) [TaxId: 3562]
d3qi0f_ : (TYR191) (GLY244) [view usage] : b.69.5.2 |7-bladed beta-propeller |RCC1/BLIP-II |beta-lactamase inhibitor protein-II, BLIP-II |automated matches |Streptomyces exfoliatus [TaxId: 1905]
d1p35a_ : (CYS2) (ASN48) [view usage] : b.28.1.1 |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |AcMNPV (Autographa californica nuclear polyhedrosis virus) [TaxId: 46015]
d1p35b_ : (CYS2) (ASN48) [view usage] : b.28.1.1 |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |AcMNPV (Autographa californica nuclear polyhedrosis virus) [TaxId: 46015]
d1gyka_ : (PHE33) (TYR74) [view usage] : b.29.1.5 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Pentraxin (pentaxin) |Serum amyloid P component (SAP) |Human (Homo sapiens) [TaxId: 9606]
d2quxm_ : (ILE4) (LEU44) [view usage] : d.85.1.1 |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |automated matches |Pseudomonas phage [TaxId: 12023]
d1rh8a_ : (ALA4635) (SER4695) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |Piccolo |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4wjka_ : (SER399) (ARG447) [view usage] : b.69.8.0 |7-bladed beta-propeller |Integrin alpha N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ks6a_ : (PRO3) (ILE55) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |TGF-beta type II receptor extracellular domain |Chicken (Gallus gallus) [TaxId: 9031]
d1flga_ : (VAL140) (ASP190) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Ethanol dehydrogenase |Pseudomonas aeruginosa [TaxId: 287]
d3c9fa2 : (ASN142) (PRO191) [view usage] : d.159.1.2 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain |Yeast (Candida albicans) [TaxId: 5476]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, b.82, d.159, b.69, b.29, b.67, e.18, d.151, b.18, d.3, b.2, b.6, b.1, d.17, d.85, b.7, b.3, g.18, g.7,
b.105, d.181, b.28