Protein Concepts Dictionary

Tableau information

Concept source:  d1azea_  amino acid (a.a.) range (MET1)(ASN42)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)    (VAL7) E1
	    (VAL7)   (ALA13) E2
	   (ASP15)   (ARG21) E3
	   (ILE24)   (ASN29) E4
	   (LYS38)   (ASN42) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      -89.2°   E2                          
E3      -71.3° -152.4°   E3                   
E4      124.2°   57.7° -149.8°   E4            
E5      -81.7° -103.9°   55.2°  144.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1gfca_ :     (GLY1)   (HIS43)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |Human (Homo sapiens) [TaxId: 9606]
 d1t0ha_ :    (PHE62)  (LYS110)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |SH3-like domain of the L-type calcium channel |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2drka_ :     (ILE5)   (ASN45)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Acanthamoeba castellanii [TaxId: 5755]
 d2x3wd_ :   (VAL385)  (ASP426)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4cc4f_ :  (ASN1515) (ASN1560)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3eg3a_ :    (LEU65)  (LYS105)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2d0na_ :   (PRO266)  (HIS306)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1opla1 :    (ASN83)  (LYS124)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Abl tyrosine kinase, SH3 domain |Human (Homo sapiens) [TaxId: 9606]
 d1azea_ :     (MET1)   (ASN42)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |Human (Homo sapiens) [TaxId: 9606]
 d1opka1 :    (ASN83)  (LYS124)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Abl tyrosine kinase, SH3 domain |Mouse (Mus musculus) [TaxId: 10090]
 d1zlma_ :    (GLY12)   (LYS55)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2abla1 :    (LEU84)  (LYS124)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Abl tyrosine kinase, SH3 domain |Human (Homo sapiens) [TaxId: 9606]
 d1awoa_ :    (SER64)  (LYS105)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Abl tyrosine kinase, SH3 domain |Human (Homo sapiens) [TaxId: 9606]
 d3eg2a_ :    (LEU65)  (LYS105)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2gnca_ :     (PHE8)   (ASN47)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1s1na_ :   (GLU155)  (ALA195)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2d0nc_ :   (PRO266)  (HIS306)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2frwa_ :     (ILE1)   (ASN41)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1zunb1 :   (LYS283)  (HIS324)   [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Sulfate adenylate transferase subunit cysN/C, EF-Tu domain 2-like domain |Pseudomonas syringae pv. tomato [TaxId: 323]
 d1utia_ :     (ARG2)   (HIS42)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Grb2-related adaptor protein 2 (Mona/Gads) |Mouse (Mus musculus) [TaxId: 10090]
 d1udla_ :    (CYS35)   (ASN75)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Intersectin 2 (KIAA1256) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.34,    b.43