Tableau information
Concept source: d1b23p1 amino acid (a.a.) range (PRO220)(GLY257)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO220) (GLU226) E1
(GLU226) (THR230) E2
(GLY235) (ARG241) E3
(GLY245) (VAL249) E4
(ASP251) (GLY257) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -72.5° E2
E3 103.1° 163.7° E3
E4 -76.4° 8.2° -156.8° E4
E5 -56.1° -111.7° 76.4° -119.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2efga1 : (PRO308) (THR345) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor G (EF-G), domain II |Thermus thermophilus [TaxId: 274]
d1xe1a_ : (GLY27) (PRO61) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Hypothetical protein PF0907 |Pyrococcus furiosus [TaxId: 2261]
d1r5ba1 : (PRO468) (PRO503) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Eukaryotic peptide chain release factor ERF2, post-G domain |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1e0ta1 : (LEU129) (GLY162) [view usage] : b.58.1.1 |PK beta-barrel domain-like |PK beta-barrel domain-like |Pyruvate kinase beta-barrel domain |Pyruvate kinase (PK) |Escherichia coli [TaxId: 562]
d1pkma1 : (LEU179) (GLY212) [view usage] : b.58.1.1 |PK beta-barrel domain-like |PK beta-barrel domain-like |Pyruvate kinase beta-barrel domain |Pyruvate kinase (PK) |Cat (Felis catus) [TaxId: 9685]
d1jnya1 : (PRO232) (PRO269) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor eEF-1alpha, domain 2 |Sulfolobus solfataricus [TaxId: 2287]
d4iw3b2 : (PRO213) (GLY250) [view usage] : b.43.3.0 |Reductase/isomerase/elongation factor common domain |Translation proteins |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
d1b23p1 : (PRO220) (GLY257) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor Tu (EF-Tu), domain 2 |Thermus aquaticus [TaxId: 271]
d1a49a1 : (LEU179) (LEU210) [view usage] : b.58.1.1 |PK beta-barrel domain-like |PK beta-barrel domain-like |Pyruvate kinase beta-barrel domain |Pyruvate kinase (PK) |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1ttta1 : (PRO220) (GLY257) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor Tu (EF-Tu), domain 2 |Thermus aquaticus [TaxId: 271]
d1exma1 : (PRO220) (GLY257) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor Tu (EF-Tu), domain 2 |Thermus thermophilus [TaxId: 274]
d4pgoa_ : (GLY27) (PRO61) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Hypothetical protein PF0907 |Pyrococcus furiosus [TaxId: 2261]
d4pgoa_ : (GLY63) (GLN107) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Hypothetical protein PF0907 |Pyrococcus furiosus [TaxId: 2261]
d1aipa1 : (PRO220) (GLY257) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor Tu (EF-Tu), domain 2 |Thermus thermophilus [TaxId: 274]
d1zunb1 : (ASP243) (PRO280) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Sulfate adenylate transferase subunit cysN/C, EF-Tu domain 2-like domain |Pseudomonas syringae pv. tomato [TaxId: 323]
d3vmfa2 : (PRO232) (PRO269) [view usage] : b.43.3.0 |Reductase/isomerase/elongation factor common domain |Translation proteins |automated matches |automated matches |Aeropyrum pernix [TaxId: 272557]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.43, b.58