Tableau information
Concept source: d2pbid_ amino acid (a.a.) range (GLY175)(ASP225)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY175) (ASP181) E1
(LEU188) (GLY193) E2
(ALA196) (SER206) E3
(PHE212) (GLY216) E4
(LYS219) (ASP225) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 164.8° E2
E3 -44.4° 120.4° E3
E4 149.9° -44.4° 159.1° E4
E5 -29.1° 143.3° -43.7° 157.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1pgua1 : (ALA274) (LEU326) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Actin interacting protein 1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3sh4a_ : (LEU73) (PRO124) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4gaaa1 : (TYR154) (GLY204) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]
d3n0da_ : (VAL283) (ASP333) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2rd1a1 : (THR22) (ASN62) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |Putative outer membrane lipoprotein STM1585 |Salmonella typhimurium [TaxId: 90371]
d2crma1 : (TYR53) (THR111) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) |Human (Homo sapiens) [TaxId: 9606]
d4fyqa1 : (ASN234) (SER285) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h6ka_ : (VAL283) (ASP333) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h9la_ : (VAL283) (ASP333) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2lroa_ : (GLU101) (ALA170) [view usage] : b.18.1.30 |Galactose-binding domain-like |Galactose-binding domain-like |CBM11 |automated matches |Clostridium thermocellum [TaxId: 203119]
d4jnfa1 : (VAL436) (THR500) [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3c0db_ : (ARG29) (SER79) [view usage] : b.33.1.3 |ISP domain |ISP domain |NirD-like |NADH-nitrite reductase small subunit NirD |Vibrio parahaemolyticus [TaxId: 670]
d1n7ua_ : (LEU313) (GLN382) [view usage] : b.126.1.1 |Adsorption protein p2 |Adsorption protein p2 |Adsorption protein p2 |Adsorption protein p2 |Bacteriophage PRD1 [TaxId: 10658]
d2h13a_ : (VAL283) (ASP333) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fhba3 : (ARG52) (ASP129) [view usage] : b.3.1.3 |Prealbumin-like |Starch-binding domain-like |PUD-like |Pullulanase PulA |Klebsiella pneumoniae [TaxId: 573]
d3izbx_ : (TYR31) (GLU75) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1a12a_ : (LEU36) (GLY92) [view usage] : b.69.5.1 |7-bladed beta-propeller |RCC1/BLIP-II |Regulator of chromosome condensation RCC1 |Regulator of chromosome condensation RCC1 |Human (Homo sapiens) [TaxId: 9606]
d2g9aa_ : (VAL283) (SER332) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3mdjb1 : (SER204) (SER252) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qnfa1 : (SER204) (SER252) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3emha_ : (VAL283) (SER332) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nlqa_ : (GLU47) (LYS105) [view usage] : b.121.3.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Nucleoplasmin-like core domain |Nucleoplasmin-like core domain |Chromatin decondensation protein 1 (Crp1, Nlp) |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d4iuga2 : (ASP469) (ALA518) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Fungus (Aspergillus oryzae) [TaxId: 5062]
d2h68b_ : (VAL283) (ASP333) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3vlbb_ : (ILE49) (TRP123) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Fungus (Aspergillus aculeatus) [TaxId: 5053]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.69, i.1, b.29, b.18, b.121, b.1, b.38, b.3, b.71, b.130, b.33, b.98, b.126