Tableau information
Concept source: d2a73a2 amino acid (a.a.) range (SER121)(TYR188)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER121) (ASN131) E1
(THR140) (GLU146) E2
(VAL153) (GLN161) E3
(GLY165) (GLU175) E4
(GLY180) (TYR188) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 147.1° E2
E3 -40.1° 157.8° E3
E4 156.3° -20.8° 163.5° E4
E5 -28.1° 167.9° -33.2° 153.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1m1ga1 : (GLY82) (ILE128) [view usage] : b.114.1.1 |N-utilization substance G protein NusG, insert domain |N-utilization substance G protein NusG, insert domain |N-utilization substance G protein NusG, insert domain |N-utilization substance G protein NusG, insert domain |Aquifex aeolicus [TaxId: 63363]
d1nr0a2 : (ARG513) (MET565) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Actin interacting protein 1 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1o94d_ : (GLY113) (THR154) [view usage] : c.26.2.3 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |ETFP subunits |Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain |Methylophilus methylotrophus [TaxId: 17]
d1q5la_ : (SER434) (SER504) [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |DnaK |Escherichia coli [TaxId: 562]
d4fp8d_ : (SER199) (THR262) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1evua2 : (ASN517) (LEU588) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d1utca2 : (ALA247) (ARG297) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2v4va_ : (ASP969) (GLY1025) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Clostridium cellulolyticum [TaxId: 1521]
d4mzaa_ : (ILE202) (VAL274) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Human parainfluenza 3 virus [TaxId: 11217]
d2ed6a1 : (LEU116) (TYR198) [view usage] : b.170.1.1 |WSSV envelope protein-like |WSSV envelope protein-like |WSSV envelope protein-like |Envelope protein VP28 |White spot syndrome virus, WSSV [TaxId: 92652]
d1rfxa_ : (LYS43) (LEU90) [view usage] : g.77.1.1 |Resistin |Resistin |Resistin |Resistin (ADSF, FIZZ3) |Mouse (Mus musculus) [TaxId: 10090]
d1vf5d1 : (VAL79) (CYS128) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |ISP subunit from the cytochrome b6f complex, soluble domain |Mastigocladus laminosus [TaxId: 83541]
d2v37a_ : (SER1) (ARG63) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3h0oa_ : (ASP58) (VAL114) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |automated matches |Fibrobacter succinogenes [TaxId: 833]
d2vn5a_ : (GLY44) (LYS110) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cohesin domain |Clostridium cellulolyticum [TaxId: 1521]
d3kwua1 : (LYS690) (ASP757) [view usage] : b.7.1.0 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1a8da1 : (ILE138) (GLY197) [view usage] : b.29.1.6 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Clostridium neurotoxins, the second last domain |Tetanus neurotoxin |Clostridium tetani [TaxId: 1513]
d2vn6a_ : (GLY44) (LYS110) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cohesin domain |Clostridium cellulolyticum [TaxId: 1521]
d1jb0d_ : (THR4) (TYR57) [view usage] : d.187.1.1 |Photosystem I subunit PsaD |Photosystem I subunit PsaD |Photosystem I subunit PsaD |Photosystem I subunit PsaD |Synechococcus elongatus [TaxId: 32046]
d1ncga_ : (SER33) (VAL98) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |N-cadherin (neural) |Mouse (Mus musculus) [TaxId: 10090]
d4fyqa3 : (PHE549) (ASN609) [view usage] : b.1.30.0 |Immunoglobulin-like beta-sandwich |Zn aminopeptidase insert domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2eeaa_ : (LYS38) (ASN95) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
d1zm1b_ : (ASP58) (VAL114) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Fibrobacter succinogenes [TaxId: 833]
d1xrua1 : (ARG201) (THR250) [view usage] : b.82.1.13 |Double-stranded beta-helix |RmlC-like cupins |KduI-like |5-keto-4-deoxyuronate isomerase KduI |Escherichia coli [TaxId: 562]
d1v2ia_ : (ILE202) (VAL274) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Hemagglutinin-neuraminidase glycoprotein |Human parainfluenza virus type 3 [TaxId: 11216]
d1ncia_ : (SER33) (VAL98) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |N-cadherin (neural) |Mouse (Mus musculus) [TaxId: 10090]
d3c2ua1 : (LYS83) (MET143) [view usage] : b.67.2.0 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |automated matches |automated matches |Selenomonas ruminantium [TaxId: 971]
d3gxmc1 : (LEU65) (ASP474) [view usage] : b.71.1.2 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 |Glucosylceramidase |Human (Homo sapiens) [TaxId: 9606]
d1o96b1 : (GLY113) (THR154) [view usage] : c.26.2.3 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |ETFP subunits |Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain |Methylophilus methylotrophus [TaxId: 17]
d2edna_ : (LYS44) (GLU115) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bj0a_ : (VAL84) (HIS146) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |automated matches |Rhodothermus marinus [TaxId: 29549]
d1gu3a_ : (GLY51) (PHE106) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |Cellulose-binding domain of cellulase C |Cellulomonas fimi [TaxId: 1708]
d4edba_ : (ASN195) (SER257) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d4mzea_ : (ILE202) (VAL274) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Human parainfluenza 3 virus [TaxId: 11217]
d2nlra_ : (ASP1) (GLN43) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Family 12 endo-1,4-beta-glucanase (cellulase) catalytic domain |Streptomyces lividans, CelB2 [TaxId: 1916]
d1g5ba_ : (ILE172) (GLN217) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |lambda ser/thr protein phosphatase |Bacteriophage lambda [TaxId: 10710]
d3ck2a1 : (PRO114) (ARG173) [view usage] : d.159.1.7 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |YfcE-like |Uncharacterized protein SP1879 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1mvea_ : (ASP58) (VAL114) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Fibrobacter succinogenes [TaxId: 833]
d1diwa1 : (ASN998) (THR1059) [view usage] : b.29.1.6 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Clostridium neurotoxins, the second last domain |Tetanus neurotoxin |Clostridium tetani [TaxId: 1513]
d1c01a_ : (SER1) (ASN45) [view usage] : b.11.1.5 |gamma-Crystallin-like |gamma-Crystallin-like |Plant antimicrobial protein MIAMP1 |Plant antimicrobial protein MIAMP1 |Macadamia nut (Macadamia integrifolia) [TaxId: 60698]
d1eusa_ : (LEU331) (TYR385) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Micromonospora sialidase, N-terminal domain |Micromonospora viridifaciens [TaxId: 1881]
d2o34a1 : (GLY129) (ALA189) [view usage] : d.96.2.2 |T-fold |ApbE-like |DVU1097-like |Hypothetical protein DVU1097 |Desulfovibrio vulgaris [TaxId: 881]
d1zm1a_ : (ASP58) (VAL114) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Fibrobacter succinogenes [TaxId: 833]
d3fuqa1 : (ILE977) (SER1036) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
d1wcsa2 : (ALA86) (TRP157) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Trypanosoma sialidase |Trypanosoma rangeli [TaxId: 5698]
d2r49a_ : (GLY67) (GLY124) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Fibrobacter succinogenes [TaxId: 833]
d1op4a_ : (ASP39) (ARG91) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |N-cadherin (neural) |Mouse (Mus musculus) [TaxId: 10090]
d1xsia3 : (GLY624) (ARG664) [view usage] : b.71.1.4 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |Putative glucosidase YicI, domain 3 |Putative glucosidase YicI, domain 3 |Escherichia coli [TaxId: 562]
d3iuna1 : (TRP151) (LEU212) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d1ckra_ : (ASN432) (ASN503) [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |DnaK |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2klta_ : (MET521) (LEU591) [view usage] : b.1.27.1 |Immunoglobulin-like beta-sandwich |CalX-like |CalX-beta domain |automated matches |Dog (Canis familiaris) [TaxId: 9615]
d1tg7a4 : (SER524) (LEU568) [view usage] : b.71.1.5 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |Beta-galactosidase LacA, domain 2 |Beta-galactosidase LacA, domain 2 |Penicillium sp. [TaxId: 5081]
d1g6ea_ : (ASN40) (TYR87) [view usage] : b.11.1.6 |gamma-Crystallin-like |gamma-Crystallin-like |Antifungal protein AFP1 |Antifungal protein AFP1 |Streptomyces tendae, tu901 [TaxId: 1932]
d4iuga2 : (ASN522) (LEU565) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Fungus (Aspergillus oryzae) [TaxId: 5062]
d1nkga1 : (ARG257) (TYR309) [view usage] : b.3.1.2 |Prealbumin-like |Starch-binding domain-like |Rhamnogalacturonase B, RhgB, middle domain |Rhamnogalacturonase B, RhgB, middle domain |Fungus (Aspergillus aculeatus) [TaxId: 5053]
d3zs3a_ : (ALA1) (ARG56) [view usage] : b.25.1.0 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |automated matches |automated matches |Malus x [TaxId: 3750]
d3hr9a_ : (GLY67) (GLY124) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Fibrobacter succinogenes [TaxId: 833]
d2o72a1 : (GLY32) (VAL98) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Human (Homo sapiens) [TaxId: 9606]
d2cjsa1 : (LEU3) (TRP65) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |Unc-13 homolog A |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1dg4a_ : (ALA435) (SER504) [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |DnaK |Escherichia coli [TaxId: 562]
d1gvia2 : (ILE544) (TRP588) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Maltogenic amylase |Thermus sp. [TaxId: 275]
d3axda_ : (GLY67) (GLY124) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |automated matches |Fibrobacter succinogenes [TaxId: 59374]
d2ee9a_ : (LYS17) (TYR74) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
d1hfia_ : (GLU1) (MET52) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Factor H, 15th and 16th modules |Human (Homo sapiens) [TaxId: 9606]
d1we5a3 : (ALA623) (ASP665) [view usage] : b.71.1.4 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |Putative glucosidase YicI, domain 3 |Putative glucosidase YicI, domain 3 |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.82, b.19, d.159, b.69, b.29, c.26, b.67, b.18, b.2, d.96, b.1, b.25, b.11, b.7, b.3, b.71, b.130, g.18, b.33,
d.187, b.114, b.170, g.77