Protein Concepts Dictionary

Tableau information

Concept source:  d2vu9a1  amino acid (a.a.) range (ILE878)(LYS929)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE878)  (ARG882) E1
	  (SER896)  (SER902) E2
	  (LYS903)  (ASP907) E3
	  (ASN912)  (ASN918) E4
	  (SER922)  (LYS929) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      -38.8°   E2                          
E3      -74.7° -104.3°   E3                   
E4       91.7°   53.3°  143.3°   E4            
E5      144.8°  163.5°  -90.6° -117.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3obra1 :   (ILE869)  (LEU918)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d3fuoa1 :   (ILE877)  (LYS928)   [view usage] : b.29.1.6 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Clostridium neurotoxins, the second last domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d3btaa1 :   (ILE877)  (LEU927)   [view usage] : b.29.1.6 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Clostridium neurotoxins, the second last domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
 d2vu9a1 :   (ILE878)  (LYS929)   [view usage] : b.29.1.6 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Clostridium neurotoxins, the second last domain |automated matches |Clostridium botulinum [TaxId: 36826]
 d4iqpa1 :   (ILE878)  (LYS929)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d3pmea1 :   (ILE873)  (LEU922)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d3ogga1 :   (ILE869)  (LEU918)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d4jrab1 :   (ILE878)  (LYS929)   [view usage] : b.29.1.6 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Clostridium neurotoxins, the second last domain |automated matches |Clostridium botulinum [TaxId: 1491]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29