Tableau information
Concept source: d2b1ma_ amino acid (a.a.) range (HIS168)(LYS226)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS168) (GLY174) E1
(GLY174) (ASP179) E2
(GLY180) (SER189) E3
(GLY198) (GLN203) E4
(TYR217) (LYS226) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 76.8° E2
E3 124.4° 140.6° E3
E4 -74.3° -59.3° 151.0° E4
E5 -54.2° -126.5° 71.5° -116.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2b1ma_ : (HIS168) (LYS226) [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Pachyrhizus erosus [TaxId: 109171]
d3bpma_ : (HIS183) (LEU249) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1ypob_ : (LEU227) (ALA272) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hq8a_ : (MET171) (ARG230) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |NK cell-activating receptor nkg2d |Mouse (Mus musculus) [TaxId: 10090]
d1npza_ : (HIS164) (ILE217) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin S |Human (Homo sapiens) [TaxId: 9606]
d3s3qa_ : (GLY268) (ILE322) [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d3rs1a_ : (PRO160) (LEU205) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3qsda_ : (GLY268) (ILE322) [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d1sb2a1 : (ILE63) (GLN130) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin alpha chain |Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId: 8717]
d1v4la_ : (GLN66) (THR132) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin alpha chain |Taiwan habu (Trimeresurus mucrosquamatus), mucrocetin [TaxId: 103944]
d1ioda_ : (LYS63) (ALA129) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin alpha chain |Hundred-pace snake (Deinagkistrodon acutus), different isoforms [TaxId: 36307]
d1cpja_ : (GLY197) (ILE250) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin B |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1pbha_ : (GLY197) (PRO251) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin B |Human (Homo sapiens) [TaxId: 9606]
d1fltw_ : (TYR45) (CYS104) [view usage] : g.17.1.1 |Cystine-knot cytokines |Cystine-knot cytokines |Platelet-derived growth factor-like |Vascular endothelial growth factor, VEGF |Human (Homo sapiens) [TaxId: 9606]
d2fq9a_ : (GLY160) (ILE218) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2as8a1 : (ALA171) (LEU222) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |Major mite fecal allergen der p 1 |House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]
d1zq1a1 : (GLU27) (GLU71) [view usage] : b.38.3.1 |Sm-like fold |GatD N-terminal domain-like |GatD N-terminal domain-like |Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD |Pyrococcus abyssi [TaxId: 29292]
d3bx4a_ : (GLY73) (LEU134) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Agkistrodon rhodostoma [TaxId: 8717]
d3bcna_ : (HIS157) (UNK209) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |automated matches |Tabernaemontana divaricata [TaxId: 52861]
d1ms6a_ : (HIS164) (ILE217) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin S |Human (Homo sapiens) [TaxId: 9606]
d1buua1 : (GLY166) (PRO220) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1gmya_ : (GLY197) (ILE250) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin B |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.169, d.3, b.38, g.17