Tableau information
Concept source: d2prna_ amino acid (a.a.) range (VAL160)(GLY233)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL160) (ASN172) E1
(MET174) (ASP184) E2
(ASP192) (ASN203) E3
(ALA205) (ASP214) E4
(GLY221) (GLY233) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 172.0° E2
E3 -17.4° 170.5° E3
E4 150.5° -22.3° 166.1° E4
E5 -39.6° 147.1° -25.1° 168.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2xjpa_ : (THR189) (ASP245) [view usage] : b.179.1.2 |Anthrax protective antigen N-terminal-like |PA14-like |GLEYA domain |GLEYA domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1izna_ : (ASN138) (GLN213) [view usage] : e.43.1.1 |Subunits of heterodimeric actin filament capping protein Capz |Subunits of heterodimeric actin filament capping protein Capz |Capz alpha-1 subunit |Capz alpha-1 subunit |Chicken (Gallus gallus) [TaxId: 9031]
d1iznc_ : (ASN138) (GLN213) [view usage] : e.43.1.1 |Subunits of heterodimeric actin filament capping protein Capz |Subunits of heterodimeric actin filament capping protein Capz |Capz alpha-1 subunit |Capz alpha-1 subunit |Chicken (Gallus gallus) [TaxId: 9031]
d2vokb_ : (ALA62) (ALA117) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3bsda_ : (THR10) (ASN90) [view usage] : b.75.1.1 |Bacteriochlorophyll A protein |Bacteriochlorophyll A protein |Bacteriochlorophyll A protein |automated matches |Chlorobaculum tepidum [TaxId: 1097]
d2iwge_ : (ALA51) (ALA107) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |52 kDa Ro protein |Human (Homo sapiens) [TaxId: 9606]
d4axob_ : (VAL33) (ASN97) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d3stmx_ : (LYS36) (LYS80) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d2xjra_ : (THR189) (ASP245) [view usage] : b.179.1.2 |Anthrax protective antigen N-terminal-like |PA14-like |GLEYA domain |GLEYA domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1rw9a3 : (SER475) (HIS536) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Chondroitinase AC |Arthrobacter aurescens [TaxId: 43663]
d2o62a2 : (GLY69) (LEU126) [view usage] : b.60.1.9 |Lipocalins |Lipocalins |All1756-like |Uncharacterized protein All1756 ortholog |Nostoc punctiforme [TaxId: 272131]
d3wjva_ : (ASP127) (MET180) [view usage] : b.125.1.2 |LolA-like prokaryotic lipoproteins and lipoprotein localization factors |Prokaryotic lipoproteins and lipoprotein localization factors |Outer membrane lipoprotein receptor LolB |Outer membrane lipoprotein receptor LolB |Escherichia coli [TaxId: 562]
d1ns4a_ : (THR108) (GLY169) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
d1hwwa2 : (VAL744) (HIS797) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3sala_ : (PHE333) (LEU378) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 385582]
d1po3a_ : (THR440) (GLY549) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Outer membrane transporter FecA |Escherichia coli [TaxId: 562]
d1by5a_ : (ASN583) (ASN682) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Ferric hydroxamate uptake receptor FhuA |Escherichia coli [TaxId: 562]
d3stna_ : (ILE35) (LYS80) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d2cr0a_ : (ASN13) (GLY58) [view usage] : b.15.1.4 |HSP20-like chaperones |HSP20-like chaperones |Nuclear movement domain |Nuclear migration protein nudC |Mouse (Mus musculus) [TaxId: 10090]
d1eg1a_ : (GLY125) (ALA222) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Endoglucanase I [TaxId: 51453]
d4nn0c_ : (GLY141) (MET196) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1f1sa4 : (VAL736) (ASP798) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Hyaluronate lyase |Streptococcus agalactiae [TaxId: 1311]
d3wjta_ : (ARG49) (ALA94) [view usage] : b.125.1.2 |LolA-like prokaryotic lipoproteins and lipoprotein localization factors |Prokaryotic lipoproteins and lipoprotein localization factors |Outer membrane lipoprotein receptor LolB |Outer membrane lipoprotein receptor LolB |Escherichia coli [TaxId: 562]
d2w7qa_ : (ALA125) (PHE177) [view usage] : b.125.1.0 |LolA-like prokaryotic lipoproteins and lipoprotein localization factors |Prokaryotic lipoproteins and lipoprotein localization factors |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2gska_ : (ASP241) (THR338) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Outer membrane cobalamin transporter BtuB |Escherichia coli [TaxId: 562]
d3cy4b_ : (THR83) (ASP148) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain |Cow (Bos taurus) [TaxId: 9913]
d1vyfa_ : (LYS81) (SER133) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Fatty acid-binding protein Sm14 |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d2cnaa_ : (LEU61) (ASN131) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Concanavalin A |Jack bean (Canavalia ensiformis) [TaxId: 3823]
d1fcpa_ : (GLY572) (ALA676) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Ferric hydroxamate uptake receptor FhuA |Escherichia coli [TaxId: 562]
d1h54a2 : (ASP108) (ASP174) [view usage] : b.30.5.3 |Supersandwich |Galactose mutarotase-like |Glycosyltransferase family 36 N-terminal domain |Lactobacillus maltose phosphorylase, N-terminal domain |Lactobacillus brevis [TaxId: 1580]
d1cb8a3 : (PHE435) (ASN489) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Chondroitinase AC |Pedobacter heparinus (Flavobacterium heparinum) [TaxId: 984]
d1cb8a3 : (GLY495) (GLU531) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Chondroitinase AC |Pedobacter heparinus (Flavobacterium heparinum) [TaxId: 984]
d1qffa_ : (GLY574) (ALA678) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Ferric hydroxamate uptake receptor FhuA |Escherichia coli [TaxId: 562]
d1j0ma3 : (THR482) (GLY544) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Xanthan lyase |Bacillus sp. GL1 [TaxId: 84635]
d2e24a3 : (THR482) (GLY544) [view usage] : b.30.5.0 |Supersandwich |Galactose mutarotase-like |automated matches |automated matches |Bacillus sp. [TaxId: 84635]
d2xjua_ : (THR189) (ASP245) [view usage] : b.179.1.2 |Anthrax protective antigen N-terminal-like |PA14-like |GLEYA domain |GLEYA domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2f1aa2 : (VAL744) (HIS797) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1rj8a_ : (VAL283) (THR338) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Ectodysplasin A, Eda-a1 |Human (Homo sapiens) [TaxId: 9606]
d3qorc_ : (ASN165) (GLY210) [view usage] : b.15.1.0 |HSP20-like chaperones |HSP20-like chaperones |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1r6va_ : (GLY483) (PHE570) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Fervidolysin |Fervidobacterium pennivorans [TaxId: 93466]
d4gq7a_ : (THR162) (ASP218) [view usage] : b.179.1.2 |Anthrax protective antigen N-terminal-like |PA14-like |GLEYA domain |automated matches |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d2quxb_ : (ILE18) (ILE90) [view usage] : d.85.1.1 |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |automated matches |Pseudomonas phage [TaxId: 12023]
d1c9ia2 : (PRO61) (THR103) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1htya2 : (VAL744) (HIS797) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2zpca_ : (ASN105) (LEU154) [view usage] : b.125.1.1 |LolA-like prokaryotic lipoproteins and lipoprotein localization factors |Prokaryotic lipoproteins and lipoprotein localization factors |Outer-membrane lipoproteins carrier protein LolA |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1hn0a4 : (GLY724) (LEU785) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Chondroitin ABC lyase I |Proteus vulgaris [TaxId: 585]
d3aaaa_ : (GLY139) (ASP214) [view usage] : e.43.1.1 |Subunits of heterodimeric actin filament capping protein Capz |Subunits of heterodimeric actin filament capping protein Capz |Capz alpha-1 subunit |Capz alpha-1 subunit |Chicken (Gallus gallus) [TaxId: 9031]
d1h54b2 : (ASP108) (ALA173) [view usage] : b.30.5.3 |Supersandwich |Galactose mutarotase-like |Glycosyltransferase family 36 N-terminal domain |Lactobacillus maltose phosphorylase, N-terminal domain |Lactobacillus brevis [TaxId: 1580]
d1q25a1 : (LYS66) (ARG118) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-independent mannose-6-phosphate receptor (MIR-receptor) |Cow (Bos taurus) [TaxId: 9913]
d1r7aa1 : (THR439) (ASP494) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Sucrose phosphorylase |Bifidobacterium adolescentis [TaxId: 1680]
d1h4gb_ : (ASN6) (ARG49) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
d3t2oa5 : (HIS735) (LEU776) [view usage] : b.30.5.0 |Supersandwich |Galactose mutarotase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1phoa_ : (ARG210) (VAL292) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Escherichia coli, different sequences [TaxId: 562]
d2xjva_ : (THR189) (ASP245) [view usage] : b.179.1.2 |Anthrax protective antigen N-terminal-like |PA14-like |GLEYA domain |GLEYA domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2oypa_ : (ASP24) (SER80) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.82, b.69, b.29, b.30, f.4, b.60, b.1, b.125, c.41, b.179, b.22, d.85, e.43, b.71, b.15, b.64, b.75