Tableau information
Concept source: d1bywa_ amino acid (a.a.) range (GLU91)(VAL131)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU91) (ALA97) E1
(ALA97) (LYS101) E2
(GLY103) (LEU107) E3
(LEU107) (ASN117) E4
(ILE123) (VAL131) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -68.6° E2
E3 -131.3° 149.9° E3
E4 156.2° 92.2° 72.1° E4
E5 -39.1° -91.3° 96.3° 161.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1u5db_ : (ILE109) (ALA144) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Src kinase-associated phosphoprotein SKAP55 (SCAP1) |Human (Homo sapiens) [TaxId: 9606]
d2yrya_ : (THR23) (LYS55) [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2coda1 : (LYS8) (ASN41) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Centaurin-delta 1 |Human (Homo sapiens) [TaxId: 9606]
d2uzsa_ : (VAL7) (LYS39) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a4ea_ : (GLY73) (PHE131) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3ue6c_ : (ASP279) (LYS319) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Vaucheria frigida [TaxId: 195983]
d2ggka1 : (GLY89) (LYS127) [view usage] : d.160.1.2 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |Carbamilase |N-carbamoyl-D-aminoacid amidohydrolase |Agrobacterium radiobacter [TaxId: 358]
d1u5gb_ : (ILE118) (GLY153) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Src-associated adaptor protein Skap2 |Mouse (Mus musculus) [TaxId: 10090]
d2ggla1 : (GLY89) (LYS127) [view usage] : d.160.1.2 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |Carbamilase |N-carbamoyl-D-aminoacid amidohydrolase |Agrobacterium radiobacter [TaxId: 358]
d1btkb_ : (ILE5) (GLU41) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Bruton's tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]
d1v5pa_ : (ASN15) (MET50) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Tapp2 |Mouse (Mus musculus) [TaxId: 10090]
d1fo6a_ : (GLY89) (LYS127) [view usage] : d.160.1.2 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |Carbamilase |N-carbamoyl-D-aminoacid amidohydrolase |Agrobacterium radiobacter [TaxId: 358]
d1n06b_ : (GLY63) (HIS98) [view usage] : b.43.5.1 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |ATP-dependent riboflavin kinase-like |Riboflavin kinase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d2dkpa_ : (VAL22) (ARG54) [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t3eb1 : (PRO671) (VAL732) [view usage] : b.85.6.1 |beta-clip |MoeA C-terminal domain-like |MoeA C-terminal domain-like |Gephyrin, C-terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2pr5b_ : (PRO87) (ASP125) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1lvob_ : (SER59) (VAL90) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Transmissible gastroenteritis virus [TaxId: 11149]
d1v89a_ : (ILE9) (LYS40) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Rho-GTPase-activating protein 25 (KIAA0053) |Human (Homo sapiens) [TaxId: 9606]
d2lula_ : (ILE16) (ARG54) [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1w1hd_ : (LEU458) (ASP488) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
d4pnka3 : (ILE560) (GLY592) [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zjca1 : (GLY265) (GLU298) [view usage] : e.60.1.1 |Thermophilic metalloprotease-like |Thermophilic metalloprotease-like |Thermophilic metalloprotease (M29) |Aminopeptidase S, AMPS |Staphylococcus aureus [TaxId: 1280]
d4icra_ : (GLY265) (GLU298) [view usage] : e.60.1.0 |Thermophilic metalloprotease-like |Thermophilic metalloprotease-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1s66l_ : (VAL92) (ASP132) [view usage] : d.110.3.2 |Profilin-like |PYP-like sensor domain (PAS domain) |Heme-binding PAS domain |Direct oxygen sensor protein, DOS |Escherichia coli [TaxId: 562]
d4icsa_ : (GLY265) (GLU298) [view usage] : e.60.1.0 |Thermophilic metalloprotease-like |Thermophilic metalloprotease-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d2gj3b_ : (LYS94) (ARG134) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Azotobacter vinelandii [TaxId: 354]
d1n06a_ : (GLY63) (HIS98) [view usage] : b.43.5.1 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |ATP-dependent riboflavin kinase-like |Riboflavin kinase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d2l0wa_ : (GLU90) (VAL131) [view usage] : d.110.3.6 |Profilin-like |PYP-like sensor domain (PAS domain) |Flavin-binding PAS domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3p8ka_ : (VAL76) (ASP109) [view usage] : d.160.1.0 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d4eesa_ : (THR452) (ASP491) [view usage] : d.110.3.6 |Profilin-like |PYP-like sensor domain (PAS domain) |Flavin-binding PAS domain |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1w1hb_ : (LEU458) (ASP488) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
d3odoa2 : (VAL649) (ASP682) [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pr6b_ : (PRO87) (ASP125) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1m9sa4 : (MET553) (SER614) [view usage] : b.34.11.1 |SH3-like barrel |Prokaryotic SH3-related domain |GW domain |Internalin B, C-terminal domains |Listeria monocytogenes [TaxId: 1639]
d1lw3a1 : (LYS85) (MET117) [view usage] : b.55.1.8 |PH domain-like barrel |PH domain-like |GRAM domain |Myotubularin-related protein 2, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1u5ga1 : (ILE118) (GLY153) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Src-associated adaptor protein Skap2 |Mouse (Mus musculus) [TaxId: 10090]
d2bjra2 : (GLY310) (GLY338) [view usage] : b.169.1.1 |MFPT repeat-like |MFPT repeat-like |MFPT repeat |Sperm motility protein MFP2 |Pig roundworm (Ascaris suum), isoform B [TaxId: 6253]
d3zv8a_ : (ASP95) (ASN139) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human enterovirus [TaxId: 42789]
d1flga_ : (GLU322) (ASP352) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Ethanol dehydrogenase |Pseudomonas aeruginosa [TaxId: 287]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, e.5, b.47, e.60, b.85, d.160, d.110, b.55, b.34, b.43, b.169