Tableau information
Concept source: d2z6da_ amino acid (a.a.) range (LYS194)(LYS238)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS194) (GLY198) E1
(LEU200) (LYS204) E2
(GLY207) (TRP211) E3
(LEU213) (ASP222) E4
(ILE227) (LYS238) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -75.2° E2
E3 -100.3° 147.5° E3
E4 -168.8° 100.1° 78.0° E4
E5 -7.3° -80.6° 93.1° 164.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1xg2a_ : (ALA160) (PHE199) [view usage] : b.80.1.5 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectin methylesterase |automated matches |Solanum lycopersicum [TaxId: 4081]
d2okdc_ : (VAL10) (ASP53) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Vaccinia virus [TaxId: 10245]
d2l9la_ : (HIS83) (ASN125) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4fyqa1 : (LYS126) (LYS167) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1l1nb_ : (ILE94) (ASN139) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human poliovirus 1 Mahoney [TaxId: 12081]
d2ppla2 : (THR428) (PRO466) [view usage] : b.12.1.0 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2coca1 : (LEU9) (GLY43) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |FYVE, RhoGEF and PH domain containing protein 3, FGD3 |Human (Homo sapiens) [TaxId: 9606]
d1t9fa_ : (VAL31) (HIS98) [view usage] : b.42.6.1 |beta-Trefoil |MIR domain |MIR domain |Hypothetical protein R12E2.13 (1D10) |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d3o8yb1 : (ASP78) (ASP113) [view usage] : b.12.1.0 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3zvfa_ : (ASP95) (ASN139) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human enterovirus [TaxId: 42789]
d4dcda_ : (ILE94) (ASN139) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human poliovirus 1 [TaxId: 12081]
d3r42a_ : (SER44) (PRO88) [view usage] : d.20.1.2 |UBC-like |UBC-like |UEV domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3m9qb_ : (ASP6) (GLN57) [view usage] : b.34.13.0 |SH3-like barrel |Chromo domain-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3m1ib_ : (LEU86) (ARG128) [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3sj9a_ : (THR95) (ASN139) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human coxsackievirus a16 [TaxId: 31704]
d3sj8a_ : (THR93) (ASN139) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human coxsackievirus a16 [TaxId: 31704]
d1p97a_ : (GLY64) (LEU108) [view usage] : d.110.3.7 |Profilin-like |PYP-like sensor domain (PAS domain) |Hypoxia-inducible factor Hif2a, C-terminal domain |Hypoxia-inducible factor Hif2a, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3lh4a_ : (ALA55) (ALA114) [view usage] : d.17.1.0 |Cystatin-like |Cystatin/monellin |automated matches |automated matches |Ixodes scapularis [TaxId: 6945]
d1uw0a_ : (GLU3) (TRP50) [view usage] : g.39.1.12 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |PARP-type zinc finger |DNA ligase III |Human (Homo sapiens) [TaxId: 9606]
d2gj3a_ : (LYS94) (SER137) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Azotobacter vinelandii [TaxId: 354]
d2z6da_ : (LYS194) (LYS238) [view usage] : d.110.3.6 |Profilin-like |PYP-like sensor domain (PAS domain) |Flavin-binding PAS domain |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1l1na_ : (ILE94) (ASN139) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human poliovirus 1 Mahoney [TaxId: 12081]
d1dbga_ : (LYS80) (ALA109) [view usage] : b.80.1.4 |Single-stranded right-handed beta-helix |Pectin lyase-like |Chondroitinase B |Chondroitinase B |Pedobacter heparinus [TaxId: 984]
d1g28a_ : (ARG990) (GLU1031) [view usage] : d.110.3.6 |Profilin-like |PYP-like sensor domain (PAS domain) |Flavin-binding PAS domain |Photoreceptor phy3 flavin-binding domain, lov2 |Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]
d1gq8a_ : (ALA164) (LYS203) [view usage] : b.80.1.5 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectin methylesterase |Pectin methylesterase PemA |Carrot (Daucus carota) [TaxId: 4039]
d1hzka_ : (GLY59) (PHE109) [view usage] : b.1.7.1 |Immunoglobulin-like beta-sandwich |Actinoxanthin-like |Actinoxanthin-like |Antitumor antibiotic C-1027 |Streptomyces globisporus [TaxId: 1908]
d3v98a1 : (ASP78) (ASP113) [view usage] : b.12.1.0 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, b.47, b.18, b.85, b.1, d.20, d.110, b.42, d.17, b.55, b.34, b.98, b.12, g.39