Tableau information
Concept source: d1mppa_ amino acid (a.a.) range (THR77)(ASP105)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR77) (ILE83) E1
(ILE83) (ASP87) E2
(ASP87) (GLY92) E3
(GLY93) (LYS97) E4
(GLN99) (ASP105) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 67.6° E2
E3 126.8° -60.3° E3
E4 -58.0° -115.3° 159.0° E4
E5 106.0° 138.4° 105.7° -90.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1z8ra_ : (LYS70) (GLY103) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human coxsackievirus b4 [TaxId: 12073]
d2a4oa_ : (MET128) (LYS164) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human hepatitis a virus hu/northern africa/mbb/1978 [TaxId: 12100]
d1j71a_ : (LEU87) (THR116) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Yeast (Candida tropicalis) [TaxId: 5482]
d1mppa_ : (THR77) (ASP105) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin |Mucor pusillus [TaxId: 4840]
d4icqa_ : (ARG261) (LYS288) [view usage] : e.60.1.0 |Thermophilic metalloprotease-like |Thermophilic metalloprotease-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1fkna_ : (GLN73) (THR103) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |beta-secretase (memapsin) |Human (Homo sapiens) [TaxId: 9606]
d1jv2a4 : (ALA96) (ASP132) [view usage] : b.69.8.1 |7-bladed beta-propeller |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |Human (Homo sapiens), isoform V [TaxId: 9606]
d3ej8a_ : (GLU343) (TRP372) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3t3ca_ : (GLY52) (GLY78) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d1d0ca_ : (GLY329) (TRP358) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Cow (Bos taurus) [TaxId: 9913]
d1edqa1 : (LYS28) (ASN67) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Chitinase A, N-terminal domain N |Serratia marcescens [TaxId: 615]
d1flha_ : (GLY78) (THR106) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin(ogen) |Human (Homo sapiens), isoform 3A [TaxId: 9606]
d2fona1 : (ASP160) (ARG209) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
d2qzxa_ : (GLY87) (SER116) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |automated matches |Yeast (Candida albicans) [TaxId: 5476]
d1w07a3 : (ASP160) (ARG209) [view usage] : e.6.1.2 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |acyl-CoA oxidase N-terminal domains |Acyl-coenzyme A oxidase 1, domains 1 and 2 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2qzwa_ : (GLY87) (LYS116) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |automated matches |Yeast (Candida albicans) [TaxId: 5476]
d1fq4a_ : (GLY78) (SER106) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]
d3vlaa_ : (ASN103) (PRO140) [view usage] : b.50.1.0 |Acid proteases |Acid proteases |automated matches |automated matches |Carrot (Daucus carota) [TaxId: 4039]
d1qs8b_ : (GLY80) (ASP107) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Plasmepsin (a hemoglobin-degrading enzyme) |Plasmodium vivax [TaxId: 5855]
d5pepa_ : (GLY78) (THR106) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin(ogen) |Pig (Sus scrofa) [TaxId: 9823]
d1l1pa_ : (ALA6) (ALA45) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Trigger factor PPIase domain |Escherichia coli [TaxId: 562]
d1urta_ : (ASN86) (ASN124) [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Mouse (Mus musculus), liver, isozyme V [TaxId: 10090]
d2lc7a_ : (THR157) (ILE197) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1apte_ : (GLY78) (SER109) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]
d3r23a1 : (ILE180) (VAL217) [view usage] : d.142.1.0 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.69, b.74, b.47, e.60, b.50, e.6, d.174, b.1, d.142, d.26, b.36