Tableau information
Concept source: d1w9sa_ amino acid (a.a.) range (GLU13)(GLU52)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU13) (GLU18) E1
(ASP21) (GLY25) E2
(GLY25) (GLY30) E3
(GLY37) (ILE43) E4
(TRP48) (GLU52) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -47.9° E2
E3 -105.4° 109.9° E3
E4 60.5° 41.0° 150.7° E4
E5 127.0° 173.3° -74.9° 134.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2v4va_ : (SER926) (ASN963) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Clostridium cellulolyticum [TaxId: 1521]
d1i5pa1 : (THR492) (THR535) [view usage] : b.18.1.3 |Galactose-binding domain-like |Galactose-binding domain-like |delta-Endotoxin, C-terminal domain |delta-Endotoxin, C-terminal domain |Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]
d1wmxa_ : (LEU8) (THR69) [view usage] : b.18.1.24 |Galactose-binding domain-like |Galactose-binding domain-like |Family 30 carbohydrate binding module, CBM30 (PKD repeat) |Endoglucanase CelJ |Clostridium thermocellum [TaxId: 1515]
d1zjaa2 : (GLY521) (ILE553) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Pseudomonas mesoacidophila [TaxId: 265293]
d1w9sa_ : (GLU13) (GLU52) [view usage] : b.18.1.10 |Galactose-binding domain-like |Galactose-binding domain-like |Family 6 carbohydrate binding module, CBM6 |Hypothetical protein BH0236 |Bacillus halodurans [TaxId: 86665]
d2ea3a_ : (PHE1) (ASN42) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Cellulomonas bogoriensis [TaxId: 301388]
d1gnya_ : (VAL94) (ALA139) [view usage] : b.18.1.11 |Galactose-binding domain-like |Galactose-binding domain-like |CBM15 |Xylan-binding module from xylanase 10c |Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
d1uxza_ : (ILE3) (TYR42) [view usage] : b.18.1.10 |Galactose-binding domain-like |Galactose-binding domain-like |Family 6 carbohydrate binding module, CBM6 |Cellulase B (lichenase 5a) |Cellvibrio mixtus [TaxId: 39650]
d4go8a2 : (GLY521) (ILE553) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Pseudomonas mesoacidophila [TaxId: 265293]
d1uyxa_ : (ILE3) (TYR42) [view usage] : b.18.1.10 |Galactose-binding domain-like |Galactose-binding domain-like |Family 6 carbohydrate binding module, CBM6 |Cellulase B (lichenase 5a) |Cellvibrio mixtus [TaxId: 39650]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.47, b.18, b.71