Tableau information
Concept source: d3bi3a_ amino acid (a.a.) range (ALA152)(ARG210)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA152) (GLY158) E1
(ASP163) (HIS172) E2
(ASP174) (GLY179) E3
(PHE185) (PRO191) E4
(ARG204) (ARG210) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 149.1° E2
E3 17.5° -140.5° E3
E4 157.1° -53.8° -154.6° E4
E5 -34.0° 116.9° -25.1° -162.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2qdna1 : (CYS52) (VAL98) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Glucocorticoid-induced TNF-related ligand, TNFSF18 |Mouse (Mus musculus) [TaxId: 10090]
d1qwrb_ : (GLY275) (ILE316) [view usage] : b.82.1.3 |Double-stranded beta-helix |RmlC-like cupins |Type I phosphomannose isomerase |Mannose-6-phosphate isomerase ManA |Bacillus subtilis [TaxId: 1423]
d4nida_ : (ALA152) (ARG210) [view usage] : b.82.2.10 |Double-stranded beta-helix |Clavaminate synthase-like |AlkB-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3i3qa_ : (ALA152) (ARG210) [view usage] : b.82.2.10 |Double-stranded beta-helix |Clavaminate synthase-like |AlkB-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3bu7b_ : (GLY305) (PHE346) [view usage] : b.82.1.23 |Double-stranded beta-helix |RmlC-like cupins |Gentisate 1,2-dioxygenase-like |Gentisate 1,2-dioxygenase |Silicibacter pomeroyi [TaxId: 89184]
d3khbb_ : (ALA152) (ARG210) [view usage] : b.82.2.10 |Double-stranded beta-helix |Clavaminate synthase-like |AlkB-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3i3qb_ : (ALA152) (ARG210) [view usage] : b.82.2.10 |Double-stranded beta-helix |Clavaminate synthase-like |AlkB-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1lr5a_ : (GLY72) (SER124) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Auxin binding protein |Maize (Zea mays) [TaxId: 4577]
d1pmia_ : (GLY389) (ALA441) [view usage] : b.82.1.3 |Double-stranded beta-helix |RmlC-like cupins |Type I phosphomannose isomerase |Phosphomannose isomerase |Yeast (Candida albicans) [TaxId: 5476]
d2jiga_ : (THR178) (VAL246) [view usage] : b.82.2.15 |Double-stranded beta-helix |Clavaminate synthase-like |proly-4-hydroxylase (P4H, PHD) like |P4H-1 |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d4niha_ : (ALA152) (ARG210) [view usage] : b.82.2.10 |Double-stranded beta-helix |Clavaminate synthase-like |AlkB-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1lr5b_ : (GLY72) (SER124) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Auxin binding protein |Maize (Zea mays) [TaxId: 4577]
d3khca_ : (ALA152) (ARG210) [view usage] : b.82.2.10 |Double-stranded beta-helix |Clavaminate synthase-like |AlkB-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1qwra_ : (GLY277) (ILE316) [view usage] : b.82.1.3 |Double-stranded beta-helix |RmlC-like cupins |Type I phosphomannose isomerase |Mannose-6-phosphate isomerase ManA |Bacillus subtilis [TaxId: 1423]
d4bifa_ : (GLY68) (GLU111) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Granulicella tundricola [TaxId: 1198114]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, b.22