Tableau information
Concept source: d2hvja1 amino acid (a.a.) range (GLN3)(SER54)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN3) (PRO7) E1
(GLY8) (LYS13) E2
(ALA16) (GLY26) E3
(SER31) (ARG40) E4
(GLY44) (SER54) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 37.0° E2
E3 153.5° -166.5° E3
E4 -41.5° -58.4° 134.4° E4
E5 113.9° 105.0° -64.4° 155.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2fcba2 : (TRP92) (ARG136) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), IIb [TaxId: 9606]
d2y3na_ : (VAL6) (THR68) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |automated matches |Bacteroides cellulosolvens [TaxId: 35825]
d1qtpa1 : (ASN765) (VAL816) [view usage] : b.1.10.1 |Immunoglobulin-like beta-sandwich |Clathrin adaptor appendage domain |Alpha-adaptin ear subdomain-like |Alpha-adaptin AP2 ear domain, N-terminal subdomain |Mouse (Mus musculus) [TaxId: 10090]
d1zt1a1 : (ARG181) (VAL231) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class I MHC, alpha-3 domain |Mouse (Mus musculus) [TaxId: 10090]
d1um4l1 : (ILE4) (ARG48) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d1z7zi3 : (GLN1) (LEU43) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Intercellular adhesion molecule-1, ICAM-1 |Human (Homo sapiens) [TaxId: 9606]
d1zmya1 : (VAL2) (GLY54) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Camel (Camelus dromedarius) [TaxId: 9838]
d2z35a_ : (ASP1) (ARG51) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ae6h1 : (GLN3) (GLY53) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d4jkwa_ : (GLN3) (ALA53) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1l3wa3 : (ALA218) (GLY266) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |C-cadherin ectodomain |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1pdka1 : (VAL2) (THR53) [view usage] : b.1.11.1 |Immunoglobulin-like beta-sandwich |PapD-like |Pilus chaperone |Pilus chaperone PapD, N-domain |Escherichia coli [TaxId: 562]
d3cu7a4 : (PRO351) (ASP403) [view usage] : b.1.29.5 |Immunoglobulin-like beta-sandwich |Macroglobulin |Complement C3 MG4-like |Complement C5 MG4 |Human (Homo sapiens) [TaxId: 9606]
d1qtfa_ : (TYR150) (VAL214) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Exfoliative toxin B |Staphylococcus aureus [TaxId: 1280]
d3lpwa1 : (THR5) (ALA56) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c08b_ : (ASP1) (TYR47) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.2 [TaxId: 10090]
d1ic7h_ : (ASP1) (TYR47) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.2 [TaxId: 10090]
d3rfzc1 : (GLY1) (THR51) [view usage] : b.1.11.1 |Immunoglobulin-like beta-sandwich |PapD-like |Pilus chaperone |automated matches |Escherichia coli [TaxId: 562]
d1c16a2 : (GLY1) (ALA49) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC homolog |Mouse (Mus musculus), t22 [TaxId: 10090]
d1qppb1 : (ALA1) (THR53) [view usage] : b.1.11.1 |Immunoglobulin-like beta-sandwich |PapD-like |Pilus chaperone |Pilus chaperone PapD, N-domain |Escherichia coli [TaxId: 562]
d3qzoc_ : (GLN124) (PHE176) [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 158879]
d2p9ra_ : (ILE152) (PHE201) [view usage] : b.1.29.3 |Immunoglobulin-like beta-sandwich |Macroglobulin |Complement C3 MG2-like |Alpha-2-macroglobulin MG2 |Human (Homo sapiens) [TaxId: 9606]
d1q55a_ : (ASP216) (GLY266) [view usage] : i.20.1.1 |Ep-cadherin |Ep-cadherin |Ep-cadherin |Ep-cadherin |Mouse (Mus musculus) [TaxId: 10090]
d1zxqa2 : (LYS1) (LEU45) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Intercellular adhesion molecule-2, ICAM-2 |Human (Homo sapiens) [TaxId: 9606]
d3vi3a2 : (PRO450) (ALA519) [view usage] : b.1.15.0 |Immunoglobulin-like beta-sandwich |Integrin domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tyja1 : (VAL4) (THR66) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin ScaA |Bacteroides cellulosolvens [TaxId: 35825]
d2cria_ : (ILE14) (PRO63) [view usage] : b.1.11.0 |Immunoglobulin-like beta-sandwich |PapD-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4a6ya1 : (GLN1) (ILE50) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3uqyl_ : (TRP353) (PRO412) [view usage] : e.18.1.0 |HydB/Nqo4-like |HydB/Nqo4-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1kgya_ : (ASP147) (CYS205) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |Ligand-binding domain of the ephb2 receptor tyrosine kinase |Mouse (Mus musculus) [TaxId: 10090]
d4gsxb2 : (GLY304) (GLY349) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Dengue virus 1 [TaxId: 11059]
d2w88a_ : (LEU59) (VAL103) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Plastocyanin |Phormidium laminosum [TaxId: 32059]
d1b9ka1 : (ASN765) (VAL816) [view usage] : b.1.10.1 |Immunoglobulin-like beta-sandwich |Clathrin adaptor appendage domain |Alpha-adaptin ear subdomain-like |Alpha-adaptin AP2 ear domain, N-terminal subdomain |Mouse (Mus musculus) [TaxId: 10090]
d2xqnm_ : (SER2) (LYS66) [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |Enabled |Human (Homo sapiens) [TaxId: 9606]
d1yedb1 : (VAL2) (GLY53) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d2gtqa3 : (GLU489) (TYR539) [view usage] : b.1.30.1 |Immunoglobulin-like beta-sandwich |Zn aminopeptidase insert domain |Zn aminopeptidase insert domain |Aminopeptidase N (APN) domain 3 |Neisseria meningitidis [TaxId: 122586]
d1kiua1 : (GLY1) (PRO52) [view usage] : b.1.11.1 |Immunoglobulin-like beta-sandwich |PapD-like |Pilus chaperone |Periplasmic chaperone FimC |Escherichia coli [TaxId: 562]
d2edda_ : (PRO18) (GLU73) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2q3za3 : (GLN633) (ASN681) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), tissue isozyme [TaxId: 9606]
d1j88a2 : (TRP87) (TYR131) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |IgE high affinity receptor alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d2jjvb_ : (VAL6) (LYS53) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2giyb_ : (VAL222) (TYR277) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Alphaherpesvirus glycoprotein E |Human herpesvirus 1 [TaxId: 10298]
d3eotl1 : (GLN1) (THR52) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4nrka_ : (PRO307) (PRO339) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza b virus
d1fcga2 : (TRP90) (HIS134) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), IIa [TaxId: 9606]
d1j9ct1 : (ASN5) (CYS49) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Extracellular region of human tissue factor |Human (Homo sapiens) [TaxId: 9606]
d1ic5h_ : (ASP1) (TYR47) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.2 [TaxId: 10090]
d1vhpa_ : (GLU1) (GLY53) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Engineered (including hybrid species)
d3eyja_ : (PRO297) (GLY329) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 11320]
d2lqra_ : (ASN4) (PRO50) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1n0la1 : (ALA1) (THR53) [view usage] : b.1.11.1 |Immunoglobulin-like beta-sandwich |PapD-like |Pilus chaperone |Pilus chaperone PapD, N-domain |Escherichia coli [TaxId: 562]
d1boya1 : (ASN5) (CYS49) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Extracellular region of human tissue factor |Human (Homo sapiens) [TaxId: 9606]
d2exha1 : (PHE390) (HIS440) [view usage] : b.29.1.23 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Beta-D-xylosidase C-terminal domain-like |Beta-D-xylosidase C-terminal domain |Geobacillus stearothermophilus [TaxId: 1422]
d2mq3a_ : (PRO453) (PHE499) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yz1a_ : (LEU8) (GLU59) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2e3vc_ : (SER12) (TRP59) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Neural cell adhesion molecule 1, NCAM |Human (Homo sapiens) [TaxId: 9606]
d3l8qd1 : (GLU8) (THR52) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
d2dkua_ : (ALA8) (ALA50) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3f2la_ : (ILE7) (THR52) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |automated matches |Acetivibrio cellulolyticus [TaxId: 35830]
d3c60a1 : (ASP1) (THR51) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4dh2a_ : (TYR15) (LYS64) [view usage] : b.2.2.0 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |automated matches |automated matches |Clostridium thermocellum [TaxId: 203119]
d1figl1 : (GLU1) (ILE48) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
d3wjlc2 : (TRP87) (ARG131) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2amua_ : (HIS17) (ALA78) [view usage] : b.1.13.0 |Immunoglobulin-like beta-sandwich |Superoxide reductase-like |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d2dwyb_ : (VAL567) (GLN629) [view usage] : b.1.10.2 |Immunoglobulin-like beta-sandwich |Clathrin adaptor appendage domain |gamma-adaptin C-terminal appendage domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bdya_ : (THR43) (GLY87) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |Domain from protein kinase C delta |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3cvda_ : (LEU59) (VAL103) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Plastocyanin |Phormidium laminosum [TaxId: 32059]
d1zv9a_ : (ILE7) (THR52) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
d1py9a_ : (GLN2) (ARG52) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Myelin oligodendrocyte glycoprotein (MOG) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1f2qa2 : (TRP87) (ASN140) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |IgE high affinity receptor alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d1ic4h_ : (ASP1) (TYR47) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.2 [TaxId: 10090]
d4k55a_ : (GLN3) (ALA53) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3k3qa_ : (VAL5) (ARG68) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Llama (Lama glama) [TaxId: 9844]
d3e3qc_ : (SER2) (SER51) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2dtge1 : (GLU808) (THR862) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Insulin receptor |Human (Homo sapiens) [TaxId: 9606]
d2e6qa_ : (GLY7) (ASN50) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2p9rb_ : (SER104) (ASP146) [view usage] : b.1.29.3 |Immunoglobulin-like beta-sandwich |Macroglobulin |Complement C3 MG2-like |Alpha-2-macroglobulin MG2 |Human (Homo sapiens) [TaxId: 9606]
d2p9rb_ : (ILE152) (GLU199) [view usage] : b.1.29.3 |Immunoglobulin-like beta-sandwich |Macroglobulin |Complement C3 MG2-like |Alpha-2-macroglobulin MG2 |Human (Homo sapiens) [TaxId: 9606]
d1ghfl1 : (ASP1) (LEU46) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d1gafl1 : (ASP1) (ARG46) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d1fnha3 : (ILE183) (VAL227) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Human (Homo sapiens) [TaxId: 9606]
d2kkqa_ : (GLU11) (PHE58) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.19, b.29, b.47, e.18, b.18, b.2, b.6, b.1, d.19, b.55, b.7, i.20