Tableau information
Concept source: d1wxta_ amino acid (a.a.) range (TYR14)(TYR53)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR14) (ASN20) E1
(LEU24) (GLN28) E2
(LYS31) (ASP36) E3
(ARG40) (LYS45) E4
(GLY49) (TYR53) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -167.2° E2
E3 52.1° -136.6° E3
E4 -88.5° 89.6° 126.7° E4
E5 91.0° -88.2° -60.6° 168.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4a63d2 : (TRP1066) (PRO1110) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c04d_ : (SER6) (VAL62) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Prokaryotic (50S subunit) |Haloarcula marismortui [TaxId: 2238]
d2v1rb_ : (ASP22) (PRO69) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1q25a2 : (ALA195) (GLU253) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-independent mannose-6-phosphate receptor (MIR-receptor) |Cow (Bos taurus) [TaxId: 9913]
d1fbna_ : (GLU2) (ASN53) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Methanococcus jannaschii [TaxId: 2190]
d3r0qa_ : (GLN325) (GLU383) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1u3oa_ : (GLN24) (VAL70) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1cska_ : (TYR18) (ILE59) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Carboxyl-terminal src kinase (csk) |Human (Homo sapiens) [TaxId: 9606]
d2krna_ : (MET3) (SER53) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4ln2a_ : (ASN877) (PRO919) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nloc_ : (TYR14) (TYR55) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |c-src protein tyrosine kinase |Chicken (Gallus gallus) [TaxId: 9031]
d1x43a_ : (TYR24) (LYS65) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1eifa2 : (ASP87) (ILE128) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |C-terminal domain of eukaryotic initiation translation factor 5a (eIF5a) |Methanococcus jannaschii [TaxId: 2190]
d2v1ra_ : (ASP22) (PRO69) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1l6ja3 : (VAL216) (PRO272) [view usage] : g.14.1.2 |Kringle-like |Kringle-like |Fibronectin type II module |Gelatinase B (MMP-9) type II modules |Human (Homo sapiens) [TaxId: 9606]
d1uzya_ : (GLU2) (LEU52) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]
d3db6a_ : (ASP28) (PRO71) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1g8sa_ : (GLU2) (ASN53) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Methanococcus jannaschii [TaxId: 2190]
d1eloa1 : (ARG324) (GLU367) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor G (EF-G), domain II |Thermus thermophilus [TaxId: 274]
d3izbd_ : (LYS179) (ARG221) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2m68a_ : (GLY1564) (PHE1612) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jw4a_ : (PHE14) (PHE53) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4cc4b_ : (TYR1522) (PRO1567) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2d04g_ : (GLN51) (PRO99) [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Curculigo latifolia [TaxId: 4676]
d2pbga_ : (THR311) (GLU352) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |6-phospho-beta-D-galactosidase, PGAL |Lactococcus lactis [TaxId: 1358]
d1wxta_ : (TYR14) (TYR53) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jrma_ : (CYS6) (LYS42) [view usage] : d.206.1.1 |YggU-like |YggU-like |YggU-like |Hypothetical protein MTH637 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d2rqba_ : (LEU938) (LYS983) [view usage] : b.88.2.1 |Mss4-like |RIG-I C-terminal-like |RIG-I C-terminal domain-like |MDA5 C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1h92a_ : (HIS13) (PHE53) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |p56-lck tyrosine kinase, SH3 domain |Human (Homo sapiens) [TaxId: 9606]
d2da9a_ : (PRO15) (ASN59) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2xzmw_ : (VAL182) (THR222) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1yp5a_ : (TYR7) (TRP49) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, i.1, b.29, c.66, d.144, b.40, b.34, b.43, b.88, b.64, d.206, b.78, g.14