Tableau information
Concept source: d1qg3a1 amino acid (a.a.) range (TYR1157)(ARG1214)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR1157) (ILE1163) E1
(GLU1170) (ASP1175) E2
(PRO1179) (ASN1185) E3
(CYS1190) (ALA1201) E4
(GLY1203) (ARG1214) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 156.1° E2
E3 -33.6° 137.3° E3
E4 161.3° -42.2° 139.6° E4
E5 -36.1° 120.8° -52.5° 162.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3bpob2 : (THR133) (TRP196) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lyqb_ : (SER35) (LYS104) [view usage] : b.1.18.17 |Immunoglobulin-like beta-sandwich |E set domains |Copper resistance protein C (CopC, PcoC) |Copper resistance protein C (CopC, PcoC) |Escherichia coli [TaxId: 562]
d2edya_ : (TYR44) (ARG99) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4cc4c2 : (GLU228) (GLY281) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]
d1wfua_ : (LEU52) (THR111) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 |Mouse (Mus musculus) [TaxId: 10090]
d3vqla_ : (ILE50) (PRO113) [view usage] : b.15.1.0 |HSP20-like chaperones |HSP20-like chaperones |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d4pp8a_ : (GLY172) (THR216) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |NK cell-activating receptor nkg2d |Mouse (Mus musculus) [TaxId: 10090]
d1cjya1 : (TYR45) (THR108) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |Domain from cytosolic phospholipase A2 |Human (Homo sapiens) [TaxId: 9606]
d1usqa_ : (TYR82) (GLY134) [view usage] : b.2.3.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Dr-family adhesin |DraA/Afimbrial adhesin Afa-III |Escherichia coli [TaxId: 562]
d1lqsr2 : (HIS142) (SER204) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interleukin-10 receptor 1, IL-10R1 |Human (Homo sapiens) [TaxId: 9606]
d1h3ga1 : (GLU36) (ARG93) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Cyclomaltodextrinase, N-terminal domain |Flavobacterium sp. 92 [TaxId: 197856]
d2j43a2 : (GLY116) (SER182) [view usage] : b.3.1.3 |Prealbumin-like |Starch-binding domain-like |PUD-like |Pullulanase PulA |Streptococcus pyogenes [TaxId: 1314]
d1lqss2 : (HIS142) (SER204) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interleukin-10 receptor 1, IL-10R1 |Human (Homo sapiens) [TaxId: 9606]
d1ebpa2 : (HIS153) (LEU219) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Erythropoietin (EPO) receptor |Human (Homo sapiens) [TaxId: 9606]
d1v8ha1 : (ASN49) (LEU107) [view usage] : b.1.18.19 |Immunoglobulin-like beta-sandwich |E set domains |SoxZ-like |Sulfur oxidation protein SoxZ |Thermus thermophilus [TaxId: 274]
d4kuce_ : (TYR51) (PRO96) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1euta3 : (VAL330) (TYR385) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Micromonospora sialidase, N-terminal domain |Micromonospora viridifaciens [TaxId: 1881]
d2bjqa1 : (ASP181) (GLY253) [view usage] : b.169.1.1 |MFPT repeat-like |MFPT repeat-like |MFPT repeat |Sperm motility protein MFP2 |Pig roundworm (Ascaris suum), isoform A [TaxId: 6253]
d1uema_ : (ALA48) (ASP111) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |KIAA1568 protein |Human (Homo sapiens) [TaxId: 9606]
d1hwgb2 : (TRP169) (LEU233) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Growth hormone receptor |Human (Homo sapiens) [TaxId: 9606]
d1gxca_ : (HIS143) (THR205) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Chk2 kinase |Human (Homo sapiens) [TaxId: 9606]
d1y6nr2 : (HIS142) (ILE203) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interleukin-10 receptor 1, IL-10R1 |Human (Homo sapiens) [TaxId: 9606]
d2cmza1 : (ARG342) (PRO383) [view usage] : e.76.1.2 |Viral glycoprotein ectodomain-like |Viral glycoprotein ectodomain-like |Spike glycoprotein-like |Spike glycoprotein |Vesicular stomatitis indiana virus [TaxId: 11277]
d1fmms_ : (LEU5) (MET59) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Eastern newt (Notophthalmus viridescens) [TaxId: 8316]
d1cjyb1 : (TYR1045) (THR1108) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |Domain from cytosolic phospholipase A2 |Human (Homo sapiens) [TaxId: 9606]
d1x5la1 : (TYR44) (THR102) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Ephrin type-A receptor 8 |Human (Homo sapiens) [TaxId: 9606]
d2bera3 : (GLY219) (ARG276) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
d1qg3a1 : (TYR1157) (ARG1214) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Integrin beta-4 subunit |Human (Homo sapiens) [TaxId: 9606]
d1gnya_ : (GLU163) (LEU239) [view usage] : b.18.1.11 |Galactose-binding domain-like |Galactose-binding domain-like |CBM15 |Xylan-binding module from xylanase 10c |Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
d1x5ya1 : (TYR43) (LEU97) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Myosin binding protein C, fast-type |Mouse (Mus musculus) [TaxId: 10090]
d1hwgc2 : (TRP169) (LEU233) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Growth hormone receptor |Human (Homo sapiens) [TaxId: 9606]
d3lpwb1 : (ILE41) (GLU92) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.18, d.169, b.2, b.1, b.42, b.26, b.7, b.3, b.15, e.76, b.169