Tableau information
Concept source: d1pooa_ amino acid (a.a.) range (GLY181)(ALA225)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY181) (GLU187) E1
(TYR195) (LYS200) E2
(VAL201) (ASN207) E3
(SER208) (GLU218) E4
(GLY220) (ALA225) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 133.4° E2
E3 168.4° -50.8° E3
E4 -33.8° 116.1° 136.2° E4
E5 152.7° -72.5° -30.5° 154.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1khoa2 : (ASN256) (LYS310) [view usage] : b.12.1.3 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Alpha-toxin, C-terminal domain |Alpha-toxin, C-terminal domain |Clostridium perfringens, different strains [TaxId: 1502]
d1nr0a2 : (SER470) (GLN511) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Actin interacting protein 1 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1w2ta2 : (ASN43) (TYR89) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |automated matches |Thermotoga maritima [TaxId: 243274]
d1w2ta2 : (ARG162) (SER209) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |automated matches |Thermotoga maritima [TaxId: 243274]
d1w2ta2 : (SER212) (TRP256) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |automated matches |Thermotoga maritima [TaxId: 243274]
d1uypa2 : (ARG162) (SER209) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |Beta-fructosidase (invertase), N-terminal domain |Thermotoga maritima [TaxId: 2336]
d1uypa2 : (SER212) (TRP256) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |Beta-fructosidase (invertase), N-terminal domain |Thermotoga maritima [TaxId: 2336]
d2cmzc_ : (MET343) (THR376) [view usage] : e.76.1.2 |Viral glycoprotein ectodomain-like |Viral glycoprotein ectodomain-like |Spike glycoprotein-like |automated matches |Vesicular stomatitis indiana virus [TaxId: 11277]
d1xfda1 : (ASN404) (ARG450) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1wfja_ : (GLY10) (THR65) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |C2 domain protein At1g63220 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3dkha1 : (GLY31) (TRP94) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Fungus (Melanocarpus albomyces) [TaxId: 204285]
d1gw0a1 : (GLY31) (TRP94) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Fungus (Melanocarpus albomyces) [TaxId: 204285]
d1slia2 : (LYS677) (TYR728) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Leech intramolecular trans-sialidase, C-terminal domain |North american leech (Macrobdella decora) [TaxId: 6405]
d1ji6a2 : (GLN339) (PHE395) [view usage] : b.77.2.1 |beta-Prism I |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |Bacillus thuringiensis, CRY3bb1 [TaxId: 1428]
d3ppsa1 : (GLY32) (TRP95) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Thielavia arenaria [TaxId: 113610]
d4atfc_ : (LYS209) (ILE261) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |automated matches |Zobellia galactanivorans [TaxId: 63186]
d1l9na2 : (SER481) (PRO544) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d1vs611 : (ILE8) (ALA51) [view usage] : g.41.8.6 |Rubredoxin-like |Zn-binding ribosomal proteins |Ribosomal protein L33p |Ribosomal protein L33p |Escherichia coli [TaxId: 562]
d1l9ma2 : (SER481) (PRO544) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d1kkea2 : (VAL399) (PRO451) [view usage] : b.21.1.2 |Virus attachment protein globular domain |Virus attachment protein globular domain |Reovirus attachment protein sigma 1 head domain |Reovirus attachment protein sigma 1 head domain |Reovirus [TaxId: 10891]
d1o4za_ : (LYS209) (ILE261) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |beta-Agarase A |Zobellia galactanivorans [TaxId: 63186]
d1ueya_ : (LYS49) (TYR87) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |KIAA0343 protein |Human (Homo sapiens) [TaxId: 9606]
d4atfa_ : (LYS209) (ILE261) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |automated matches |Zobellia galactanivorans [TaxId: 63186]
d3miza_ : (ILE129) (ASP160) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhizobium etli [TaxId: 347834]
d2cmzb_ : (MET343) (SER377) [view usage] : e.76.1.2 |Viral glycoprotein ectodomain-like |Viral glycoprotein ectodomain-like |Spike glycoprotein-like |automated matches |Vesicular stomatitis indiana virus [TaxId: 11277]
d2b5la1 : (GLY187) (GLN234) [view usage] : b.69.4.3 |7-bladed beta-propeller |WD40 repeat-like |DDB1-like |DDB1 |Human (Homo sapiens) [TaxId: 9606]
d3mezb_ : (GLY67) (PRO106) [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Crocus vernus [TaxId: 87752]
d2j44a1 : (ARG173) (THR216) [view usage] : b.3.1.3 |Prealbumin-like |Starch-binding domain-like |PUD-like |Pullulanase PulA |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, b.69, b.29, b.67, c.93, b.6, b.1, b.21, b.77, b.7, b.3, g.41, b.12, e.76, b.78