Tableau information
Concept source: d1g1ob_ amino acid (a.a.) range (PRO11)(ASP74)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO11) (LEU17) E1
(VAL28) (ARG34) E2
(PHE44) (SER53) E3
(GLY57) (GLU61) E4
(ILE68) (ASP74) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 143.9° E2
E3 -58.6° 144.7° E3
E4 166.9° -38.1° 128.7° E4
E5 -33.2° 161.8° -53.5° 138.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1qaba_ : (MET13) (ILE73) [view usage] : b.3.4.1 |Prealbumin-like |Transthyretin (synonym: prealbumin) |Transthyretin (synonym: prealbumin) |Transthyretin (synonym: prealbumin) |Human (Homo sapiens) [TaxId: 9606]
d3q1ea_ : (LEU9) (GLU72) [view usage] : b.3.4.0 |Prealbumin-like |Transthyretin (synonym: prealbumin) |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1z0mb_ : (PRO79) (ASP130) [view usage] : b.1.18.21 |Immunoglobulin-like beta-sandwich |E set domains |AMPK-beta glycogen binding domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1afpa_ : (ALA1) (CYS51) [view usage] : g.26.1.1 |Antifungal protein (AGAFP) |Antifungal protein (AGAFP) |Antifungal protein (AGAFP) |Antifungal protein (AGAFP) |Fungus (Aspergillus giganteus) [TaxId: 5060]
d2db8a_ : (ASN25) (LYS87) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1z0nb_ : (THR80) (ASP130) [view usage] : b.1.18.21 |Immunoglobulin-like beta-sandwich |E set domains |AMPK-beta glycogen binding domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2lu3a_ : (GLN16) (VAL70) [view usage] : b.1.18.21 |Immunoglobulin-like beta-sandwich |E set domains |AMPK-beta glycogen binding domain-like |5'-AMP-activated protein kinase subunit beta-2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2ppla2 : (TRP356) (VAL424) [view usage] : b.12.1.0 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j0ha1 : (GLU21) (GLY91) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Neopullulanase, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d3o8yb1 : (THR7) (LYS73) [view usage] : b.12.1.0 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1z0mc_ : (THR80) (ASP130) [view usage] : b.1.18.21 |Immunoglobulin-like beta-sandwich |E set domains |AMPK-beta glycogen binding domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2qlvb1 : (PRO165) (ASP220) [view usage] : b.1.18.21 |Immunoglobulin-like beta-sandwich |E set domains |AMPK-beta glycogen binding domain-like |SIP2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1dp0a3 : (THR139) (TRP191) [view usage] : b.18.1.5 |Galactose-binding domain-like |Galactose-binding domain-like |beta-Galactosidase/glucuronidase, N-terminal domain |beta-Galactosidase |Escherichia coli [TaxId: 562]
d3iwvb_ : (LEU9) (GLU72) [view usage] : b.3.4.0 |Prealbumin-like |Transthyretin (synonym: prealbumin) |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1h8la1 : (TRP307) (ARG357) [view usage] : b.3.2.1 |Prealbumin-like |Carboxypeptidase regulatory domain-like |Carboxypeptidase regulatory domain |Carboxypeptidase D C-terminal domain |Crested duck (Lophonetta specularioides) [TaxId: 8836]
d3iwva_ : (LEU9) (GLU72) [view usage] : b.3.4.0 |Prealbumin-like |Transthyretin (synonym: prealbumin) |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1prra2 : (SER130) (SER173) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |Protein S |Myxococcus xanthus [TaxId: 34]
d1qhoa2 : (SER583) (ILE653) [view usage] : b.3.1.1 |Prealbumin-like |Starch-binding domain-like |Starch-binding domain |Cyclodextrin glycosyltransferase, C-terminal domain |Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
d1etha1 : (ALA337) (GLY394) [view usage] : b.12.1.2 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Colipase-binding domain |Pancreatic lipase, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1h6ya_ : (TYR71) (TYR136) [view usage] : b.18.1.7 |Galactose-binding domain-like |Galactose-binding domain-like |CBM22 |Xylan-binding domain |Clostridium thermocellum [TaxId: 1515]
d1hpla1 : (ARG337) (ASP394) [view usage] : b.12.1.2 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Colipase-binding domain |Pancreatic lipase, C-terminal domain |Horse (Equus caballus) [TaxId: 9796]
d2xjka_ : (PRO28) (HIS120) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ziea2 : (HIS1121) (ASP1171) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |beta-Crystallin |Norway rat (Rattus norvegicus), isoform E [TaxId: 10116]
d3v98a1 : (THR7) (LYS73) [view usage] : b.12.1.0 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gpla1 : (ARG337) (ASP394) [view usage] : b.12.1.2 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Colipase-binding domain |Pancreatic lipase, C-terminal domain |Guinea pig (Cavia porcellus) [TaxId: 10141]
d3iwvd_ : (LEU9) (GLU72) [view usage] : b.3.4.0 |Prealbumin-like |Transthyretin (synonym: prealbumin) |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d2gbua_ : (GLY27) (HIS120) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.18, b.1, b.11, b.3, b.12, g.26