Protein Concepts Dictionary

Tableau information

Concept source:  d4l7bb_  amino acid (a.a.) range (LEU471)(LEU515)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU471)  (GLY476) E1
	  (ASN485)  (TYR491) E2
	  (ASN495)  (THR501) E3
	  (THR505)  (GLY509) E4
	  (GLY509)  (LEU515) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      161.0°   E2                          
E3      -52.6°  146.1°   E3                   
E4      -97.9°   68.8°  136.4°   E4            
E5      151.1°  -47.9°   98.9° -102.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4l7bb_ :   (ARG565)  (THR609)   [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2flux1 :   (ILE328)  (VAL369)   [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |Kelch-like ECH-associated protein 1, KEAP1 |Human (Homo sapiens) [TaxId: 9606]
 d4in4b_ :   (ILE328)  (VAL369)   [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1hxna_ :   (SER342)  (MET381)   [view usage] : b.66.1.1 |4-bladed beta-propeller |Hemopexin-like domain |Hemopexin-like domain |Hemopexin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1zgka1 :   (VAL324)  (VAL369)   [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |Kelch-like ECH-associated protein 1, KEAP1 |Human (Homo sapiens) [TaxId: 9606]
 d1pkla1 :   (ASN139)  (LEU179)   [view usage] : b.58.1.1 |PK beta-barrel domain-like |PK beta-barrel domain-like |Pyruvate kinase beta-barrel domain |Pyruvate kinase (PK) |Trypanosome (Leishmania mexicana) [TaxId: 5665]
 d1p16a2 :    (LEU74)  (LEU129)   [view usage] : d.142.2.3 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |mRNA capping enzyme |mRNA capping enzyme alpha subunit |Yeast (Candida albicans) [TaxId: 5476]
 d3u5gb_ :    (TYR31)   (ARG81)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
 d1x2ja1 :   (ILE328)  (VAL369)   [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |Kelch-like ECH-associated protein 1, KEAP1 |Mouse (Mus musculus) [TaxId: 10090]
 d1u6dx_ :   (VAL324)  (VAL369)   [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |Kelch-like ECH-associated protein 1, KEAP1 |Human (Homo sapiens) [TaxId: 9606]
 d2dyha_ :   (ILE328)  (VAL369)   [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4iqka_ :   (ILE328)  (VAL369)   [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4n1bb_ :   (LEU327)  (VAL369)   [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xn4a_ :   (PRO306)  (MET351)   [view usage] : b.68.11.0 |6-bladed beta-propeller |Kelch motif |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xn4a_ :   (LEU354)  (VAL397)   [view usage] : b.68.11.0 |6-bladed beta-propeller |Kelch motif |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xn4a_ :   (LEU401)  (VAL444)   [view usage] : b.68.11.0 |6-bladed beta-propeller |Kelch motif |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xn4a_ :   (PRO507)  (VAL541)   [view usage] : b.68.11.0 |6-bladed beta-propeller |Kelch motif |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xn4a_ :   (LEU545)  (ILE589)   [view usage] : b.68.11.0 |6-bladed beta-propeller |Kelch motif |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.68,     i.1,   d.142,    b.66,    b.58