Tableau information
Concept source: d3hduc_ amino acid (a.a.) range (MSE103)(LEU155)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MSE103) (TYR109) E1
(PHE118) (ASN124) E2
(VAL125) (ASN129) E3
(LYS130) (ASN140) E4
(ILE146) (LEU155) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 134.2° E2
E3 173.3° -50.4° E3
E4 -21.2° 153.2° -155.7° E4
E5 -177.5° -45.6° -8.9° 158.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ly2a1 : (GLU0) (GLY39) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement receptor 2, cr2 |Human (Homo sapiens) [TaxId: 9606]
d2gvhb1 : (ALA62) (GLY125) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Probable acyl-CoA hydrolase AGR_L_2016 |Agrobacterium tumefaciens [TaxId: 358]
d2ov9b_ : (ALA156) (ASP209) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein RHA1_ro05818 |Rhodococcus sp. RHA1 [TaxId: 101510]
d2av9a1 : (GLU60) (PHE120) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Hypothetical thioesterase PA5185 |Pseudomonas aeruginosa [TaxId: 287]
d3k67a_ : (THR102) (LEU157) [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |Hypothetical protein AF1124 |Archaeoglobus fulgidus [TaxId: 2234]
d2b3ma1 : (LEU106) (LEU157) [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |Hypothetical protein AF1124 |Archaeoglobus fulgidus [TaxId: 2234]
d1y4wa2 : (SER105) (ASP167) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |Exo-inulinase |Aspergillus awamori [TaxId: 105351]
d1ixla_ : (GLU74) (LEU124) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein PH1136 |Pyrococcus horikoshii [TaxId: 53953]
d2q78b_ : (VAL66) (PRO120) [view usage] : d.38.1.7 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |TTHA0967-like |Uncharacterized protein TM0581 |Thermotoga maritima [TaxId: 2336]
d1eura_ : (PRO49) (ASP106) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Micromonospora sialidase, N-terminal domain |Micromonospora viridifaciens [TaxId: 1881]
d2ywca1 : (GLY90) (ALA132) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GMP synthetase |Thermus thermophilus HB8 [TaxId: 300852]
d2o6ba1 : (GLU60) (GLU122) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Hypothetical thioesterase PA5185 |Pseudomonas aeruginosa [TaxId: 287]
d1eusa_ : (PRO49) (ASP106) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Micromonospora sialidase, N-terminal domain |Micromonospora viridifaciens [TaxId: 1881]
d2gvhc1 : (ALA62) (GLY125) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Probable acyl-CoA hydrolase AGR_L_2016 |Agrobacterium tumefaciens [TaxId: 358]
d2gvha1 : (ALA62) (GLY125) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Probable acyl-CoA hydrolase AGR_L_2016 |Agrobacterium tumefaciens [TaxId: 358]
d1pn4d1 : (GLY74) (ASN135) [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase |Yeast (Candida tropicalis) [TaxId: 5482]
d3hdua_ : (MSE103) (LEU155) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Syntrophus aciditrophicus [TaxId: 56780]
d2nuja1 : (SER72) (ASN135) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Hypothetical protein Jann_1972 |Jannaschia sp. CCS1 [TaxId: 290400]
d4jiqa_ : (GLY113) (THR149) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 358]
d2av9d_ : (GLU60) (PHE120) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d4a0yb_ : (SER136) (ARG189) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d2q78a1 : (VAL66) (PRO120) [view usage] : d.38.1.7 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |TTHA0967-like |Uncharacterized protein TM0581 |Thermotoga maritima [TaxId: 2336]
d4ffub_ : (ASP86) (ILE143) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3hduc_ : (MSE103) (LEU155) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Syntrophus aciditrophicus [TaxId: 56780]
d3hdub_ : (MSE103) (LEU155) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Syntrophus aciditrophicus [TaxId: 56780]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, c.1, b.67, c.23, d.38, g.18