Tableau information
Concept source: d3fifa_ amino acid (a.a.) range (ASP4)(ASN43)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP4) (THR9) E1
(GLY12) (ASP18) E2
(LYS20) (ASP24) E3
(GLY28) (HIS33) E4
(ALA39) (ASN43) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 148.1° E2
E3 42.2° 111.8° E3
E4 -138.6° 52.5° 152.3° E4
E5 36.3° -150.3° -49.6° 154.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2aena_ : (LYS136) (ASN189) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Rotavirus a [TaxId: 10941]
d3fifc_ : (ASP4) (ASN43) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2k57a1 : (PRO4) (ASN43) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |Uncharacterized protein PSPPH2109 |Pseudomonas syringae [TaxId: 317]
d1z2wa1 : (LYS118) (SER182) [view usage] : d.159.1.7 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |YfcE-like |Vacuolar protein sorting 29, VPS29 |Mouse (Mus musculus) [TaxId: 10090]
d4drra_ : (LEU137) (THR191) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Rotavirus sp. [TaxId: 10970]
d1ntya2 : (SER1456) (LYS1513) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Triple functional domain protein TRIO |Human (Homo sapiens) [TaxId: 9606]
d3fifb_ : (ASP4) (ASN43) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2rb6b_ : (SER26) (LYS66) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |Uncharacterized protein SO0963 |Shewanella oneidensis [TaxId: 70863]
d3psna_ : (LYS118) (SER182) [view usage] : d.159.1.7 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |YfcE-like |Vacuolar protein sorting 29, VPS29 |Mouse (Mus musculus) [TaxId: 10090]
d2rb6a1 : (GLN27) (LYS66) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |Uncharacterized protein SO0963 |Shewanella oneidensis [TaxId: 70863]
d3fifa_ : (ASP4) (ASN43) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.159, b.29, b.55, b.38