Protein Concepts Dictionary

Tableau information

Concept source:  d3teaa_  amino acid (a.a.) range (GLN94)(PRO148)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN94)   (SER99) E1
	  (ARG110)  (ARG115) E2
	  (ILE116)  (SER120) E3
	  (THR121)  (ASP131) E4
	  (ALA138)  (PRO148) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      128.6°   E2                          
E3      167.7°  -47.8°   E3                   
E4      -30.8°  157.4° -154.7°   E4            
E5      172.9°  -45.0°  -14.5°  154.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3r34b_ :    (GLN94)  (PRO148)   [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |automated matches |Arthrobacter sp. [TaxId: 1667]
 d2o6ta_ :    (GLU60)  (PHE120)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Hypothetical thioesterase PA5185 |Pseudomonas aeruginosa [TaxId: 287]
 d3e8pa_ :   (ILE111)  (GLY164)   [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Shewanella oneidensis [TaxId: 70863]
 d1iq6a_ :    (GLY73)  (LYS131)   [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |(R)-specific enoyl-CoA hydratase |Aeromonas caviae [TaxId: 648]
 d2egif_ :    (GLU53)  (ASN112)   [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
 d3qy3a1 :    (GLY55)  (TRP114)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Hypothetical protein PA2801 |Pseudomonas aeruginosa [TaxId: 287]
 d2cyed_ :    (HIS52)  (GLU110)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Probable thioesterase TTHA1846 |Thermus thermophilus [TaxId: 274]
 d1iyua_ :     (SER1)   (SER46)   [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Lipoyl domain of dihydrolipoamide acetyltransferase |Azotobacter vinelandii [TaxId: 354]
 d1s9cg2 :    (GLY90)  (VAL147)   [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase |Human (Homo sapiens) [TaxId: 9606]
 d2pzhb_ :    (VAL46)  (PHE111)   [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
 d2fuja1 :    (ALA59)  (TRP114)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Hypothetical protein XCC1147 |Xanthomonas campestris pv. campestris [TaxId: 340]
 d2av9e_ :    (GLU60)  (PHE120)   [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d1o7ib_ :    (SER14)   (GLY57)   [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Archaeal ssDNA-binding protein |Sulfolobus solfataricus [TaxId: 2287]
 d1s9ci2 :    (GLY90)  (VAL147)   [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase |Human (Homo sapiens) [TaxId: 9606]
 d1iq6b_ :    (GLY73)  (LYS131)   [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |(R)-specific enoyl-CoA hydratase |Aeromonas caviae [TaxId: 648]
 d3r34a_ :    (GLN94)  (PRO148)   [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |automated matches |Arthrobacter sp. [TaxId: 1667]
 d1pn2a1 :    (GLY74)  (ASN135)   [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase |Yeast (Candida tropicalis) [TaxId: 5482]
 d2c2ia1 :    (LEU85)  (VAL150)   [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |Hypothetical protein Rv0130 |Mycobacterium tuberculosis [TaxId: 1773]
 d1rw9a2 :   (ASN694)  (LEU755)   [view usage] : b.24.1.1 |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase-like, C-terminal domain |Chondroitinase AC |Arthrobacter aurescens [TaxId: 43663]
 d3r36b_ :    (GLN94)  (PRO148)   [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |automated matches |Arthrobacter sp. [TaxId: 1667]
 d2h4ud_ :    (VAL84)  (GLY139)   [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein Them2 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.40,    d.38,    b.84,    b.24