Tableau information
Concept source: d1boqa_ amino acid (a.a.) range (ILE7)(ILE46)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE7) (ASN12) E1
(SER15) (PHE21) E2
(PHE21) (GLY26) E3
(LYS29) (ALA34) E4
(ALA42) (ILE46) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 134.1° E2
E3 67.8° 67.7° E3
E4 -83.3° 120.7° 133.2° E4
E5 140.5° -73.1° -117.7° 108.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4ohjb1 : (GLU100) (THR131) [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |automated matches |Staphylococcus aureus [TaxId: 1280]
d1gbja_ : (ILE31) (ILE66) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
d1p09a_ : (ILE29) (ILE80) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
d2c1fa_ : (TYR74) (ASP122) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Neocallimastix patriciarum [TaxId: 4758]
d4haea_ : (ASN-4) (GLU50) [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1d8ta1 : (GLU240) (LYS294) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor Tu (EF-Tu), domain 2 |Escherichia coli [TaxId: 562]
d2pfea_ : (ASN31) (SER66) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Thermobifida fusca YX [TaxId: 269800]
d2vg9a_ : (TYR72) (ASP120) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Neocallimastix patriciarum [TaxId: 4758]
d1gvmf_ : (GLY186) (ASP218) [view usage] : b.109.1.1 |beta-hairpin stack |Cell wall binding repeat |Cell wall binding repeat |Choline binding domain of autolysin C-LytA |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3urea_ : (ILE31) (GLY67) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
d1ep6c_ : (LEU242) (TRP275) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |Viral capsid protein |Venezuelan equine encephalitis virus [TaxId: 11036]
d1g1oa_ : (LEU12) (GLU61) [view usage] : b.3.4.1 |Prealbumin-like |Transthyretin (synonym: prealbumin) |Transthyretin (synonym: prealbumin) |Transthyretin (synonym: prealbumin) |Human (Homo sapiens) [TaxId: 9606]
d1vf7h_ : (LYS205) (GLN260) [view usage] : f.46.1.1 |HlyD-like secretion proteins |HlyD-like secretion proteins |HlyD-like secretion proteins |Multidrug resistance protein MexA domain |Pseudomonas aeruginosa [TaxId: 287]
d1xb2a1 : (GLU289) (LYS342) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor Tu (EF-Tu), domain 2 |Cow (Bos taurus), mitochondrial [TaxId: 9913]
d4ecpa_ : (PRO35) (GLU73) [view usage] : b.40.5.0 |OB-fold |Inorganic pyrophosphatase |automated matches |automated matches |Mycobacterium leprae [TaxId: 1769]
d4ecpb_ : (PRO35) (GLU73) [view usage] : b.40.5.0 |OB-fold |Inorganic pyrophosphatase |automated matches |automated matches |Mycobacterium leprae [TaxId: 1769]
d1gbea_ : (ILE31) (ILE66) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
d1boqa_ : (ILE7) (ILE46) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.29, b.47, b.40, f.46, b.34, b.109, b.43, b.3