Tableau information
Concept source: d2e7da_ amino acid (a.a.) range (GLY68)(ASN119)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY68) (VAL74) E1
(VAL74) (LYS79) E2
(ARG83) (PRO88) E3
(ALA94) (VAL104) E4
(GLY108) (ASN119) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -63.1° E2
E3 128.5° 160.7° E3
E4 -73.7° -40.7° 149.3° E4
E5 90.2° 125.0° -48.1° 162.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1d2oa1 : (TRP581) (TYR622) [view usage] : b.3.5.1 |Prealbumin-like |Cna protein B-type domain |Cna protein B-type domain |B repeat unit of collagen binding surface protein (cna) |Staphylococcus aureus [TaxId: 1280]
d2b2nb_ : (GLY149) (VAL194) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Transcription-repair coupling factor, TRCF |Escherichia coli [TaxId: 562]
d3rurb_ : (GLY399) (ASP450) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
d3dxoa1 : (GLY63) (LEU115) [view usage] : d.17.4.19 |Cystatin-like |NTF2-like |Atu0744-like |Uncharacterized protein Atu0744 |Agrobacterium tumefaciens [TaxId: 358]
d3ivma1 : (LYS206) (GLN274) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d2b2na1 : (GLY149) (VAL194) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Transcription-repair coupling factor, TRCF |Escherichia coli [TaxId: 562]
d4b5da_ : (PRO130) (ARG189) [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |Capitella teleta [TaxId: 283909]
d3rtld_ : (GLY399) (ASP450) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
d1jb0e_ : (GLU19) (ALA69) [view usage] : b.34.4.2 |SH3-like barrel |Electron transport accessory proteins |Photosystem I accessory protein E (PsaE) |Photosystem I accessory protein E (PsaE) |Synechococcus elongatus [TaxId: 32046]
d3p54a2 : (VAL351) (SER401) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Japanese encephalitis virus [TaxId: 11072]
d4fyra1 : (PHE182) (ASN248) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4fc3e_ : (LYS86) (ALA139) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 196620]
d1crza1 : (PHE354) (ARG392) [view usage] : b.68.4.1 |6-bladed beta-propeller |TolB, C-terminal domain |TolB, C-terminal domain |TolB, C-terminal domain |Escherichia coli [TaxId: 562]
d3quga_ : (GLY601) (ASN652) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
d2bbaa1 : (THR140) (PHE193) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |Ephrin type-B receptor 4 |Human (Homo sapiens) [TaxId: 9606]
d1im3d_ : (PRO43) (HIS90) [view usage] : b.1.18.5 |Immunoglobulin-like beta-sandwich |E set domains |Cytomegalovirus protein US2 |Cytomegalovirus protein US2 |Human cytomegalovirus [TaxId: 10359]
d2eyqa4 : (GLY149) (ASP196) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Transcription-repair coupling factor, TRCF |Escherichia coli [TaxId: 562]
d4maea_ : (GLY150) (GLN196) [view usage] : b.70.1.0 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |automated matches |automated matches |Methylacidiphilum fumariolicum [TaxId: 1156937]
d4maea_ : (TRP298) (VAL347) [view usage] : b.70.1.0 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |automated matches |automated matches |Methylacidiphilum fumariolicum [TaxId: 1156937]
d1hzua2 : (PRO324) (GLY365) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Pseudomonas aeruginosa [TaxId: 287]
d2r83a2 : (LEU202) (SER264) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |Synaptogamin I |Human (Homo sapiens) [TaxId: 9606]
d1h4ja_ : (GLY155) (THR201) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylobacterium extorquens [TaxId: 408]
d1hkxi_ : (PRO409) (GLY471) [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Mouse (Mus musculus) [TaxId: 10090]
d3jqwb_ : (GLY866) (VAL927) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Clostridium histolyticum [TaxId: 1498]
d2fdcb1 : (GLN180) (GLU226) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Nucleotide excision repair enzyme UvrB |Bacillus caldotenax [TaxId: 1395]
d3vuaa_ : (GLY601) (ASN652) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
d1gyhb_ : (VAL287) (ASP334) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |alpha-L-arabinanase |Cellvibrio cellulosa [TaxId: 155077]
d1gyha_ : (VAL287) (ASP334) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |alpha-L-arabinanase |Cellvibrio cellulosa [TaxId: 155077]
d2q03a1 : (GLY81) (ASP136) [view usage] : b.159.2.1 |AOC barrel-like |SO1590-like |SO1590-like |Uncharacterized protein Sden_2034 |Shewanella denitrificans [TaxId: 192073]
d1hkxe_ : (LYS408) (GLY471) [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Mouse (Mus musculus) [TaxId: 10090]
d1y0ga_ : (ALA105) (LYS162) [view usage] : b.61.6.1 |Streptavidin-like |YceI-like |YceI-like |Lipid binding protein YceI |Escherichia coli [TaxId: 562]
d2dwra_ : (MET64) (THR120) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human rotavirus a [TaxId: 10941]
d1g72a_ : (GLY149) (THR195) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylophilus methylotrophus, w3a1 [TaxId: 17]
d2w8ba2 : (SER332) (SER372) [view usage] : b.68.4.1 |6-bladed beta-propeller |TolB, C-terminal domain |TolB, C-terminal domain |automated matches |Escherichia coli [TaxId: 562]
d2w8ba2 : (PHE375) (PRO415) [view usage] : b.68.4.1 |6-bladed beta-propeller |TolB, C-terminal domain |TolB, C-terminal domain |automated matches |Escherichia coli [TaxId: 562]
d2dsod_ : (ALA87) (ILE128) [view usage] : b.68.6.1 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |SGL-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d1jova_ : (MET1) (SER36) [view usage] : b.30.5.7 |Supersandwich |Galactose mutarotase-like |Hypothetical protein HI1317 |Hypothetical protein HI1317 |Haemophilus influenzae [TaxId: 727]
d1mdah_ : (ALA209) (ASN252) [view usage] : b.69.2.1 |7-bladed beta-propeller |YVTN repeat-like/Quinoprotein amine dehydrogenase |Methylamine dehydrogenase, H-chain |Methylamine dehydrogenase, H-chain |Paracoccus denitrificans [TaxId: 266]
d2eyqb4 : (GLY149) (ASP196) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Transcription-repair coupling factor, TRCF |Escherichia coli [TaxId: 562]
d1gyhd_ : (VAL287) (ASP334) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |alpha-L-arabinanase |Cellvibrio cellulosa [TaxId: 155077]
d2e7da_ : (GLY68) (ASN119) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
d2ktea_ : (ASP43) (GLY104) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |automated matches |Bacillus subtilis [TaxId: 1423]
d1maeh_ : (ALA211) (LEU255) [view usage] : b.69.2.1 |7-bladed beta-propeller |YVTN repeat-like/Quinoprotein amine dehydrogenase |Methylamine dehydrogenase, H-chain |Methylamine dehydrogenase, H-chain |Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, b.69, b.29, b.67, b.30, d.129, c.37, b.18, b.1, b.96, d.17, b.34, b.61, b.7, b.3, b.98, b.159