Tableau information
Concept source: d3fcua_ amino acid (a.a.) range (ASP74)(GLU117)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP74) (GLY80) E1
(SER81) (PHE87) E2
(ALA95) (SER101) E3
(ASP102) (CYS107) E4
(GLN111) (GLU117) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.8° E2
E3 77.8° -94.8° E3
E4 -84.8° 100.4° 160.9° E4
E5 -28.3° 164.6° 99.2° -67.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ffkq_ : (THR47) (THR82) [view usage] : b.34.5.1 |SH3-like barrel |Translation proteins SH3-like domain |Ribosomal proteins L24p and L21e |Ribosomal proteins L24 (L24p) |Haloarcula marismortui [TaxId: 2238]
d3zq5a3 : (LEU437) (VAL482) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d2cnjd_ : (CYS1516) (TYR1583) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3nidc_ : (ASP74) (GLU117) [view usage] : b.69.8.1 |7-bladed beta-propeller |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |Human (Homo sapiens), isoform IIb [TaxId: 9606]
d1g9ng_ : (SER199) (VAL255) [view usage] : d.172.1.1 |gp120 core |gp120 core |gp120 core |gp120 core |Human immunodeficiency virus type 1 [TaxId: 11676]
d3fcua_ : (ASP74) (GLU117) [view usage] : b.69.8.1 |7-bladed beta-propeller |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |Human (Homo sapiens), isoform IIb [TaxId: 9606]
d3fcuc_ : (GLY63) (GLU117) [view usage] : b.69.8.1 |7-bladed beta-propeller |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |Human (Homo sapiens), isoform IIb [TaxId: 9606]
d1xbps1 : (LEU37) (ALA78) [view usage] : b.34.5.1 |SH3-like barrel |Translation proteins SH3-like domain |Ribosomal proteins L24p and L21e |Ribosomal proteins L24 (L24p) |Deinococcus radiodurans [TaxId: 1299]
d2vc2a_ : (ASP74) (GLU117) [view usage] : b.69.8.1 |7-bladed beta-propeller |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |Human (Homo sapiens), isoform IIb [TaxId: 9606]
d1j3ga_ : (HIS75) (THR120) [view usage] : d.118.1.1 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |AmpD protein |Citrobacter freundii [TaxId: 546]
d4hx6f_ : (ALA120) (TRP156) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Streptomyces globisporus [TaxId: 1908]
d3pftb_ : (GLY106) (ALA145) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Mycobacterium goodii [TaxId: 134601]
d4hx6a_ : (ALA120) (TRP156) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Streptomyces globisporus [TaxId: 1908]
d1c7sa2 : (GLY127) (GLY179) [view usage] : b.2.2.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Bacterial chitobiase, n-terminal domain |Bacterial chitobiase, n-terminal domain |Serratia marcescens [TaxId: 615]
d3n44f1 : (ASN175) (ALA226) [view usage] : f.10.1.0 |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |automated matches |automated matches |Chikungunya virus [TaxId: 37124]
d3t2da_ : (ARG203) (ARG240) [view usage] : d.280.1.1 |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |automated matches |Thermoproteus neutrophilus [TaxId: 444157]
d1vs6u1 : (LYS25) (GLN65) [view usage] : b.34.5.1 |SH3-like barrel |Translation proteins SH3-like domain |Ribosomal proteins L24p and L21e |Ribosomal proteins L24 (L24p) |Escherichia coli [TaxId: 562]
d1nkws_ : (LEU37) (ALA78) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Prokaryotic (50S subunit) |Deinococcus radiodurans [TaxId: 1299]
d1hbqa_ : (MET27) (LEU63) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Retinol binding protein |Cow (Bos taurus) [TaxId: 9913]
d4hx6g_ : (ALA120) (TRP156) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Streptomyces globisporus [TaxId: 1908]
d1gp0a_ : (CYS1516) (ASP1585) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-independent mannose-6-phosphate receptor (MIR-receptor) |Human (Homo sapiens) [TaxId: 9606]
d3pfta_ : (GLY106) (ILE142) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Mycobacterium goodii [TaxId: 134601]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.69, i.1, b.60, b.2, b.45, d.110, d.118, b.34, b.64, d.280, f.10, d.172