Protein Concepts Dictionary

Tableau information

Concept source:  d2ok5a3  amino acid (a.a.) range (ASN86)(ASP134)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN86)   (PRO91) E1
	  (ASP100)  (CYS106) E2
	  (GLY109)  (GLY114) E3
	  (ALA116)  (CYS120) E4
	  (THR130)  (ASP134) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
E2      159.0°   E2                          
E3      -53.1°  144.0°   E3                   
E4      -41.3°  156.2°   41.3°   E4            
E5      144.0°   16.1°  159.1° -156.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ok5a3 :    (ASN86)  (ASP134)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement factor B |Human (Homo sapiens) [TaxId: 9606]
 d1q3xa2 :   (SER374)  (GLU431)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Mannan-binding lectin serine protease 2 (MASP-2) domains |Human (Homo sapiens) [TaxId: 9606]
 d4jhsa1 :   (ASN213)  (CYS260)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |beta2-glycoprotein I |Human (Homo sapiens) [TaxId: 9606]
 d1h03p1 :    (ASN15)   (GLU66)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
 d2qy0a1 :   (PHE301)  (ILE356)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1c1za2 :    (GLY74)  (PRO120)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |beta2-glycoprotein I |Human (Homo sapiens) [TaxId: 9606]
 d1ojva4 :   (ASN201)  (CYS254)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
 d1h2pp1 :    (ASN15)   (GLU66)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
 d3erba3 :   (ALA140)  (GLN186)   [view usage] : g.18.1.0 |Complement control module/SCR domain |Complement control module/SCR domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ok5a2 :   (THR149)  (SER196)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement factor B |Human (Homo sapiens) [TaxId: 9606]
 d1ni5a3 :   (GLU318)  (VAL358)   [view usage] : b.153.1.2 |PheT/TilS domain |PheT/TilS domain |tRNA-Ile-lysidine synthetase, TilS, C-terminal domain |tRNA-Ile-lysidine synthetase, TilS, C-terminal domain |Escherichia coli [TaxId: 562]
 d1bt7a_ :    (GLU32)   (GLN86)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NS3 protease |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
 d1h04p1 :    (ASN15)   (GLU66)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
 d3erba2 :    (ASN77)  (CYS124)   [view usage] : g.18.1.0 |Complement control module/SCR domain |Complement control module/SCR domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1gkna2 :   (ASN971) (ARG1022)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement receptor 1, cr1 |Human (Homo sapiens) [TaxId: 9606]
 d1nwva2 :   (ASN137)  (GLU188)   [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47,    g.18,   b.153