Tableau information
Concept source: d4ov6g_ amino acid (a.a.) range (TYR29)(ASN91)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR29) (GLU38) E1
(PRO44) (THR49) E2
(GLY55) (GLY61) E3
(TYR68) (ALA74) E4
(HIS85) (ASN91) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 158.7° E2
E3 -31.0° 149.1° E3
E4 161.9° -39.4° 140.6° E4
E5 -36.3° 122.4° -52.2° 161.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3t04d_ : (LYS39) (TYR101) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1boya2 : (LEU151) (MET210) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Extracellular region of human tissue factor |Human (Homo sapiens) [TaxId: 9606]
d4lfhg2 : (VAL165) (PRO230) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3uyod_ : (PHE34) (ASN93) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1klfb1 : (SER72) (ASN136) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |Mannose-specific adhesin FimH |Escherichia coli [TaxId: 562]
d3ivma1 : (LEU320) (PRO365) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d4kkna_ : (PHE95) (GLY142) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1z6jt2 : (ASP150) (PRO206) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Extracellular region of human tissue factor |Human (Homo sapiens) [TaxId: 9606]
d1eapb2 : (SER160) (LYS220) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1aqta2 : (GLU21) (TYR63) [view usage] : b.93.1.1 |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Escherichia coli [TaxId: 562]
d1fnaa_ : (TYR32) (ILE96) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Human (Homo sapiens) [TaxId: 9606]
d1qyoa_ : (HIS148) (ALA226) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |Green fluorescent protein, GFP |Jellyfish (Aequorea victoria) [TaxId: 6100]
d1lo0h2 : (GLU154) (LYS215) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1rd6a1 : (THR75) (SER123) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Chitinase A, N-terminal domain N |Serratia marcescens [TaxId: 615]
d2yeza2 : (PRO208) (SER269) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1jjua3 : (ASP304) (ASP351) [view usage] : b.1.18.14 |Immunoglobulin-like beta-sandwich |E set domains |Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 |Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 |Paracoccus denitrificans [TaxId: 266]
d4lvhc2 : (ILE146) (SER208) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2voka_ : (CYS132) (LEU189) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ij9a1 : (ARG123) (TYR196) [view usage] : b.1.1.3 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C2 set domains |Vascular cell adhesion molecule-1 (VCAM-1) |Human (Homo sapiens) [TaxId: 9606]
d2yf5a2 : (PRO208) (SER269) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1ztxe_ : (CYS336) (SER400) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |automated matches |West Nile virus [TaxId: 11082]
d2fbed_ : (ARG129) (SER182) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |Similar to Ret finger protein-like 1 |Human (Homo sapiens) [TaxId: 9606]
d1edqa1 : (THR75) (SER123) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Chitinase A, N-terminal domain N |Serratia marcescens [TaxId: 615]
d1uuna_ : (SER73) (ALA129) [view usage] : f.6.1.2 |Leukocidin-like |Leukocidin-like |Porin MspA |Porin MspA |Mycobacterium smegmatis [TaxId: 1772]
d1yhga_ : (HIS148) (ALA226) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
d1ctna1 : (THR75) (SER123) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Chitinase A, N-terminal domain N |Serratia marcescens [TaxId: 615]
d4al8c_ : (ILE335) (GLY395) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |automated matches |Dengue virus [TaxId: 12637]
d1n26a2 : (LEU130) (SER184) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interleukin-6 receptor alpha chain, domains 2 and 3 |Human (Homo sapiens) [TaxId: 9606]
d2b59b2 : (PHE33) (ASN80) [view usage] : b.3.2.2 |Prealbumin-like |Carboxypeptidase regulatory domain-like |Pre-dockerin domain |Cellulosomal scaffolding protein A |Clostridium thermocellum [TaxId: 1515]
d1jjub_ : (ARG128) (PRO171) [view usage] : b.69.2.2 |7-bladed beta-propeller |YVTN repeat-like/Quinoprotein amine dehydrogenase |Quinohemoprotein amine dehydrogenase B chain |Quinohemoprotein amine dehydrogenase B chain |Paracoccus denitrificans [TaxId: 266]
d2ii1c_ : (GLY132) (LYS210) [view usage] : b.23.3.0 |CUB-like |Acetamidase/Formamidase-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
d1cfba2 : (PRO745) (SER810) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Neuroglian, two amino proximal Fn3 repeats |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1j0ma3 : (ASN548) (PHE589) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Xanthan lyase |Bacillus sp. GL1 [TaxId: 84635]
d2e24a3 : (ASN548) (PRO590) [view usage] : b.30.5.0 |Supersandwich |Galactose mutarotase-like |automated matches |automated matches |Bacillus sp. [TaxId: 84635]
d1ms0a2 : (VAL273) (GLY331) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Trypanosoma sialidase |Trypanosoma cruzi [TaxId: 5693]
d1zluk2 : (GLU143) (ASN210) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xfja_ : (THR79) (ASP121) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein CC0490 |Caulobacter crescentus [TaxId: 155892]
d4ca4a_ : (SER72) (ASN136) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |Mannose-specific adhesin FimH |Escherichia coli [TaxId: 562]
d1n02a_ : (SER17) (ASP86) [view usage] : b.89.1.1 |Cyanovirin-N |Cyanovirin-N |Cyanovirin-N |Cyanovirin-N |Nostoc ellipsosporum [TaxId: 45916]
d1r6va_ : (LYS578) (ASN636) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Fervidolysin |Fervidobacterium pennivorans [TaxId: 93466]
d2cjtc_ : (TYR23) (PRO81) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ogmx1 : (ASP127) (ALA198) [view usage] : b.133.1.1 |Dextranase, N-terminal domain |Dextranase, N-terminal domain |Dextranase, N-terminal domain |Dextranase, N-terminal domain |Penicillium minioluteum [TaxId: 28574]
d3i50l2 : (ASP143) (SER208) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3iuna1 : (LEU320) (PRO365) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d2yf1a2 : (PRO208) (TRP270) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1opoa_ : (LYS296) (ARG347) [view usage] : b.121.4.7 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tombusviridae-like VP |Carmovirus coat protein |CarMV (Carnation mottle virus) [TaxId: 11986]
d4iiqc1 : (GLN34) (ASP95) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d2d0va_ : (ALA43) (ASP95) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |automated matches |Hyphomicrobium denitrificans [TaxId: 53399]
d2ed7a_ : (PHE51) (ALA109) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ahwc2 : (ASP150) (GLY211) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Extracellular region of human tissue factor |Human (Homo sapiens) [TaxId: 9606]
d1ljmb_ : (THR2101) (THR2161) [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Human (Homo sapiens) [TaxId: 9606]
d4pchb_ : (TYR76) (GLN178) [view usage] : b.121.6.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |automated matches |automated matches |Polyomavirus hpyv7 [TaxId: 746831]
d1e79h2 : (ARG34) (SER78) [view usage] : b.93.1.1 |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d3csba1 : (TYR405) (ASN464) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Escherichia coli K-12 [TaxId: 83333]
d1cd9b1 : (PRO35) (SER96) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Granulocyte colony-stimulating factor (GC-SF) receptor |Mouse (Mus musculus) [TaxId: 10090]
d2ibga1 : (TYR613) (ALA667) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Hedgehog receptor iHog |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2ox5a_ : (ARG50) (LYS103) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Paracoccus denitrificans [TaxId: 266]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, b.69, b.29, b.30, d.194, b.121, b.2, b.1, c.41, b.7, b.3, b.133, b.23, f.6, d.22, b.93, b.89