Tableau information
Concept source: d1bi2a2 amino acid (a.a.) range (THR65)(GLY139)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR65) (GLY91) H1
(ASP93) (VAL107) H2
(SER109) (VAL119) H3
(GLY134) (GLY139) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 136.6° H2
H3 49.8° -138.4° H3
H4 -92.4° 45.3° -107.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1g3ya2 : (THR65) (GLY139) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Diphtheria toxin repressor (DtxR) |Corynebacterium diphtheriae [TaxId: 1717]
d3bpma_ : (GLU76) (ASN129) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d2ga1a1 : (TRP54) (ALA100) [view usage] : a.4.1.16 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Alr1493-like |Hypothetical protein Ava_0674 (Alr1493 orthologue) |Anabaena variabilis [TaxId: 1172]
d4ap4e_ : (THR98) (LYS144) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rqea1 : (VAL335) (GLN401) [view usage] : a.5.7.2 |RuvA C-terminal domain-like |post-HMGL domain-like |Conserved carboxylase domain |Transcarboxylase 5S subunit, C-terminal domain |Propionibacterium freudenreichii shermanii [TaxId: 1752]
d1p92a2 : (THR65) (GLY139) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Diphtheria toxin repressor (DtxR) |Corynebacterium diphtheriae [TaxId: 1717]
d1bi2a2 : (THR65) (GLY139) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Diphtheria toxin repressor (DtxR) |Corynebacterium diphtheriae [TaxId: 1717]
d1jb0b_ : (THR2) (HIS33) [view usage] : f.29.1.1 |Photosystem I subunits PsaA/PsaB |Photosystem I subunits PsaA/PsaB |Photosystem I subunits PsaA/PsaB |Apoprotein a2, PsaB |Synechococcus elongatus [TaxId: 32046]
d2qqaa2 : (THR65) (GLY139) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Diphtheria toxin repressor (DtxR) |Corynebacterium diphtheriae [TaxId: 1717]
d2hygd2 : (THR63) (ILE133) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Manganese transport regulator MntR |Bacillus subtilis [TaxId: 1423]
d4ap4b_ : (THR98) (LYS144) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2r0oa2 : (PRO220) (SER269) [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ji0a_ : (THR96) (SER140) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Branched chain aminoacid ABC transporter |Thermotoga maritima, TM1139 [TaxId: 2336]
d2it0a2 : (THR65) (GLY139) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent regulator |Mycobacterium tuberculosis [TaxId: 1773]
d2qq9a2 : (THR65) (GLY139) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Diphtheria toxin repressor (DtxR) |Corynebacterium diphtheriae [TaxId: 1717]
d2qvja_ : (TYR324) (ASP421) [view usage] : a.260.1.1 |Rhabdovirus nucleoprotein-like |Rhabdovirus nucleoprotein-like |Rhabdovirus nucleocapsid protein |Nucleoprotein |Vesicular stomatitis indiana virus [TaxId: 11277]
d1fx7b2 : (THR65) (GLY139) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent regulator |Mycobacterium tuberculosis [TaxId: 1773]
d1v4ka_ : (THR155) (SER229) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Octoprenyl-diphosphate synthase |Thermotoga maritima [TaxId: 2336]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.128, c.37, d.3, d.20, a.4, a.40, f.29, a.76, a.5, a.260