Tableau information
Concept source: d1o5hb_ amino acid (a.a.) range (GLY23)(ILE163)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY23) (ARG47) H1
(GLU56) (TYR91) H2
(SER94) (GLU128) H3
(ALA135) (ILE163) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -173.8° H2
H3 22.3° -160.3° H3
H4 -153.4° 28.3° -162.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1k7wa_ : (ASP293) (LEU355) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d2j7ad_ : (THR357) (SER470) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Desulfovibrio vulgaris [TaxId: 882]
d1jgja_ : (VAL70) (THR167) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Sensory rhodopsin II |Natronobacterium pharaonis [TaxId: 2257]
d1gu8a_ : (PRO71) (THR167) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Sensory rhodopsin II |Natronobacterium pharaonis [TaxId: 2257]
d1occa_ : (ILE229) (ASN360) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Mitochondrial cytochrome c oxidase, subunit I |Cow (Bos taurus) [TaxId: 9913]
d3ub0e_ : (ASN10) (SER74) [view usage] : a.8.9.0 |immunoglobulin/albumin-binding domain-like |Coronavirus NSP7-like |automated matches |automated matches |Feline infectious peritonitis virus [TaxId: 33734]
d1h68a1 : (PRO71) (THR167) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Sensory rhodopsin II |Natronobacterium pharaonis [TaxId: 2257]
d3dbyc1 : (TYR6) (GLY121) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_0798 |Bacillus cereus [TaxId: 1396]
d3om3c_ : (VAL273) (SER402) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d1lw1b_ : (ILE3) (LEU63) [view usage] : a.152.1.1 |AhpD-like |AhpD-like |AhpD |Antioxidant defense protein AhpD |Mycobacterium tuberculosis [TaxId: 1773]
d3gncd2 : (LEU243) (THR372) [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d3d19b2 : (LEU147) (THR275) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_1042 |Bacillus cereus [TaxId: 1396]
d3omnc_ : (VAL273) (SER402) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d1t72b_ : (GLY3) (GLN143) [view usage] : a.7.12.1 |Spectrin repeat-like |PhoU-like |PhoU-like |Phosphate transport system protein PhoU |Aquifex aeolicus [TaxId: 63363]
d1k7wd_ : (ASP293) (THR354) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d1g7da_ : (PRO159) (LYS231) [view usage] : a.71.1.1 |ERP29 C domain-like |ERP29 C domain-like |ERP29 C domain-like |Endoplasmic reticulum protein ERP29, C-terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1sumb_ : (LEU4) (ASP139) [view usage] : a.7.12.1 |Spectrin repeat-like |PhoU-like |PhoU-like |PhoU homolog TM1734 |Thermotoga maritima [TaxId: 2336]
d1gm5a1 : (LEU21) (PHE99) [view usage] : a.24.21.1 |Four-helical up-and-down bundle |RecG, N-terminal domain |RecG, N-terminal domain |RecG, N-terminal domain |Thermotoga maritima [TaxId: 2336]
d1xjta_ : (ASP103) (THR180) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Endolysin Lyz |Bacteriophage P1 [TaxId: 10678]
d1t72e_ : (GLY2) (GLN143) [view usage] : a.7.12.1 |Spectrin repeat-like |PhoU-like |PhoU-like |Phosphate transport system protein PhoU |Aquifex aeolicus [TaxId: 63363]
d3dbyl1 : (GLU7) (GLY121) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_0798 |Bacillus cereus [TaxId: 1396]
d2nxpc_ : (ASP230) (PHE300) [view usage] : d.379.1.1 |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |TAF5 subunit of TFIID |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.127, d.2, f.24, a.152, f.13, a.138, a.29, a.24, a.71, a.8, a.7, d.379, a.191